ggKbase home page

RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_13691

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_13691_1
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

52..453
DNA (402bp) protein (134aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_13691_2
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

454..726
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2C5R2_9BACT
hypothetical protein
Uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_13691_3
GWA2_OD1_41_25_partial, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(723..1064)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Geobacter sp. (strain M21) RepID=C6E896_GEOSM
Uncharacterized protein {ECO:0000313|EMBL:KKS04359.1}; TaxID=1618736 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_41_25.;"
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_13691_4
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(1061..1897)
DNA (837bp) protein (279aa)
tRNA dimethylallyltransferase (EC:2.5.1.75); K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
tRNA dimethylallyltransferase (EC:2.5.1.75)
tRNA delta(2)-isopentenylpyrophosphate transferase n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PVQ5_9BACT
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_13691_5
GWA2_OD1_41_25_partial, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(1894..3402)
DNA (1509bp) protein (503aa)
Transcriptional regulator, XRE family {ECO:0000313|EMBL:KKS04357.1}; TaxID=1618736 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_41_25.;"
id=5226949 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_13691_6
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

3648..4625
DNA (978bp) protein (326aa)
parB-like partition protein; K03497 chromosome partitioning protein, ParB family Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
id=5227213 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
parB-like partition protein
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_13691_7
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(4622..6091)
DNA (1470bp) protein (490aa)
ppGpp synthetase/hydrolase Rel; K00951 GTP pyrophosphokinase [EC:2.7.6.5] Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
id=5227212 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
GTP pyrophosphokinase
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_13691_8
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(6134..8380)
DNA (2247bp) protein (749aa)
DNA topoisomerase I (EC:5.99.1.2); K03168 DNA topoisomerase I [EC:5.99.1.2] Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PWA5_9BACT
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_13691_9
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(8428..9291)
DNA (864bp) protein (288aa)
putative DNA processing protein; K04096 DNA processing protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
UPI0001E2C255 related cluster id=5227209 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
putative DNA processing protein
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_13691_10
GWA2_OD1_41_25_partial, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

9306..10571
DNA (1266bp) protein (422aa)
seryl-tRNA synthetase (EC:6.1.1.11)
Serine-tRNA ligase {ECO:0000313|EMBL:KKS03858.1}; TaxID=1618736 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_41_25.;"
id=5227208 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_13691_11
GWC2_OD1_41_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

10576..11472
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PXM3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKS23527.1}; TaxID=1618755 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWC2_41_8.;"
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_13691_12
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

11453..12622
DNA (1170bp) protein (390aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
hypothetical protein id=5227206 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
tRNA-dihydrouridine synthase
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_13691_13
GWC2_OD1_41_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

12635..13672
DNA (1038bp) protein (346aa)
dnaX; DNA polymerase III, subunits gamma and tau (EC:2.7.7.7); K02343 DNA polymerase III subunit gamma/tau [EC:2.7.7.7] id=5227205 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
Uncharacterized protein {ECO:0000313|EMBL:KKS23048.1}; TaxID=1618755 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWC2_41_8.;"
DNA polymerase III subunit gamma and tau
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_13691_14
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

13682..14122
DNA (441bp) protein (147aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
hypothetical protein id=5090610 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_13691_15
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(14119..14991)
DNA (873bp) protein (291aa)
Integral membrane protein DUF6 (Fragment) n=1 Tax=uncultured bacterium RepID=K1YD02_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_13691_16
GWA2_OD1_41_25_partial, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(15031..15537)
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B76444
Uncharacterized protein {ECO:0000313|EMBL:KKS03863.1}; Flags: Fragment;; TaxID=1618736 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_41_25.;"
Displaying 16 items

View Taxonomy