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RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_25620

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_25620_1
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

comp(3..683)
DNA (681bp) protein (227aa)
map; methionine aminopeptidase (EC:3.4.11.18); K01265 methionyl aminopeptidase [EC:3.4.11.18] Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SKX9_THEM7
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_25620_2
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

comp(680..1360)
DNA (681bp) protein (227aa)
adk; adenylate kinase (EC:2.7.4.3); K00939 adenylate kinase [EC:2.7.4.3] Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
adk; adenylate kinase (EC:2.7.4.3)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00036C1906
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_25620_3
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists


comp(1421..2686)
DNA (1266bp) protein (422aa)
preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY id=5803331 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
preprotein translocase subunit SecY
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_25620_4
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists


comp(2698..3147)
DNA (450bp) protein (150aa)
50S ribosomal protein L15; K02876 large subunit ribosomal protein L15 Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
50S ribosomal protein L15 id=2824223 bin=GWC1_OD1_38_17 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
50S ribosomal protein L15
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_25620_5
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists


comp(3149..3622)
DNA (474bp) protein (158aa)
30S ribosomal protein S5 n=1 Tax=Parcubacteria bacterium SCGC AAA040-L21 RepID=UPI00038194DC
30S ribosomal protein S5 Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
30S ribosomal protein S5
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_25620_6
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists


comp(3632..3985)
DNA (354bp) protein (118aa)
LSU ribosomal protein L18P Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
rplR; 50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 id=85849 bin=ACD57 species=ACD57 genus=ACD57 taxon_order=ACD57 taxon_class=ACD57 phylum=OP11 tax=ACD57 organism_group=OP11 (Microgenomates) organism_desc=OP11
rplR; 50S ribosomal protein L18
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_25620_7
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists


comp(4008..4550)
DNA (543bp) protein (181aa)
rplF; 50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
50S ribosomal protein L6, chloroplastic id=3736641 bin=GWC2_OD1_43_27 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
rplF; 50S ribosomal protein L6
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_25620_8
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists


comp(4554..4949)
DNA (396bp) protein (132aa)
30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
30S ribosomal protein S8
30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 id=5803326 bin=OD1_GWC2_34_28 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_25620_9
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists


comp(4943..5128)
DNA (186bp) protein (62aa)
30S ribosomal protein S14; K02954 small subunit ribosomal protein S14 Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
30S ribosomal protein S14; K02954 small subunit ribosomal protein S14 id=5803325 bin=OD1_GWC2_34_28 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
30S ribosomal protein S14
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_25620_10
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists


comp(5154..5747)
DNA (594bp) protein (198aa)
50S ribosomal protein L5 n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00036A0E58
rplE; 50S ribosomal protein L5 Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
rplE; 50S ribosomal protein L5
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_25620_11
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists


comp(5760..6077)
DNA (318bp) protein (106aa)
50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
ribosomal protein L24; K02895 large subunit ribosomal protein L24 id=131439 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
50S ribosomal protein L24
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_25620_12
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists


comp(6082..6447)
DNA (366bp) protein (122aa)
50S ribosomal protein L14 Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
50S ribosomal protein L14 id=3736637 bin=GWC2_OD1_43_27 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
50S ribosomal protein L14
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_25620_13
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists


comp(6451..6699)
DNA (249bp) protein (83aa)
Putative uncharacterized protein n=2 Tax=Vitis vinifera RepID=D7U0I2_VITVI
30S ribosomal protein S17, chloroplastic-like; K02961 small subunit ribosomal protein S17 Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
30S ribosomal protein S17
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_25620_14
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

comp(6696..6890)
DNA (195bp) protein (65aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_25620_15
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists


comp(6897..7307)
DNA (411bp) protein (137aa)
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 id=5803318 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
50S ribosomal protein L16
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_25620_16
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists


comp(7310..7972)
DNA (663bp) protein (221aa)
30S ribosomal protein S3 n=1 Tax=uncultured organism RepID=U3GW03_9ZZZZ
30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
30S ribosomal protein S3
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_25620_17
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists


comp(7977..8105)
DNA (129bp) protein (43aa)
rplV; 50S ribosomal protein L22; K02890 large subunit ribosomal protein L22 Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
Displaying 17 items

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