ggKbase home page

RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_3037

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_3037_1
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(17..208)
DNA (192bp) protein (64aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA255-E10 RepID=UPI00035E04A7
hypothetical protein Tax=RBG_16_RIF_OP11_02_41_13_curated
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_3037_2
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(205..2001)
DNA (1797bp) protein (599aa)
carbamoyltransferase; K00612 carbamoyltransferase [EC:2.1.3.-] Tax=RBG_16_RIF_OP11_02_41_13_curated
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K2AMF6_9BACT
carbamoyltransferase
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_3037_3
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(2001..2216)
DNA (216bp) protein (72aa)
transmembrane_regions 21..38 id=75538 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
transmembrane_regions 21..38 Tax=RBG_16_RIF_OP11_02_41_13_curated
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_3037_4
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

2278..3255
DNA (978bp) protein (326aa)
GHMP kinase; K07031 D-glycero-alpha-D-manno-heptose-7-phosphate kinase [EC:2.7.1.168] Tax=RBG_16_RIF_OP11_02_41_13_curated
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2BKW3_9BACT
GHMP kinase
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_3037_5
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

3209..3799
DNA (591bp) protein (197aa)
phosphoheptose isomerase; K03271 D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] Tax=RBG_16_RIF_OP11_02_41_13_curated
COG0279: Phosphoheptose isomerase n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI0000384811 id=75543 bin=ACD52 species=Magnetospirillum magnetotacticum genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
phosphoheptose isomerase
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_3037_6
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists


4299..6965
DNA (2667bp) protein (889aa)
leuS; leucyl-tRNA synthetase (EC:6.1.1.4); K01869 leucyl-tRNA synthetase [EC:6.1.1.4] Tax=RBG_16_RIF_OP11_02_41_13_curated
Leucine--tRNA ligase n=1 Tax=uncultured bacterium RepID=K2ALW8_9BACT
leucyl-tRNA synthetase
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_3037_7
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

6969..7550
DNA (582bp) protein (194aa)
ComEA protein; K02237 competence protein ComEA id=75541 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
competence protein ComEA; K02237 competence protein ComEA Tax=RBG_16_RIF_OP11_02_41_13_curated
competence protein ComEA helix-hairpin-helix repeat protein
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_3037_8
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

7620..8678
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZC04_9BACT
ComEC/Rec2-like protein; K02238 competence protein ComEC Tax=RBG_16_RIF_OP11_02_41_13_curated
ComEC/Rec2-like protein
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_3037_9
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

8706..9605
DNA (900bp) protein (300aa)
DNA internalization-related competence protein ComEC/Rec2; K02238 competence protein ComEC id=75587 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
comeC; DNA internalization-related competence protein,ComEC; K02238 competence protein ComEC Tax=RBG_16_RIF_OP11_02_41_13_curated
DNA internalization-related competence protein ComEC/Rec2
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_3037_10
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

9574..10068
DNA (495bp) protein (165aa)
hypothetical protein id=75586 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein Tax=RBG_16_RIF_OP11_02_41_13_curated
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_3037_11

Not on your lists

comp(10071..11030)
DNA (960bp) protein (320aa)
integrase catalytic region id=75588 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
Integrase catalytic region {ECO:0000313|EMBL:EKD62765.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
integrase catalytic subunit
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_3037_12
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(11059..12432)
DNA (1374bp) protein (458aa)
prpC; phosphoprotein phosphatase (EC:3.1.3.16) Tax=RBG_16_RIF_OP11_02_41_13_curated
prpC; phosphoprotein phosphatase (EC:3.1.3.16)
protein serine/threonine phosphatase id=75590 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_3037_13
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(12647..13246)
DNA (600bp) protein (200aa)
Tax=RBG_16_RIF_OP11_02_41_13_curated
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_3037_14
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

13640..13852
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CYU4_9BACT
Uncharacterized protein Tax=RBG_16_RIF_OP11_02_41_13_curated
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_3037_15
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

13862..15130
DNA (1269bp) protein (423aa)
id=5084989 Tax=RBG_16_RIF_OP11_02_41_13_curated
id=5084989 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_3037_16
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

15172..15390
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DC87_9BACT
Uncharacterized protein Tax=RBG_16_RIF_OP11_02_41_13_curated
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_3037_17
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

15513..17189
DNA (1677bp) protein (559aa)
argS; arginyl-tRNA synthetase (EC:6.1.1.19) Tax=RBG_16_RIF_OP11_02_41_13_curated
argS; arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase (Fragment) n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KRR5_9BACT id=85846 bin=ACD57 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=ACD57 organism_group=OP11 (Microgenomates) organism_desc=OP11
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_3037_18
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(17531..17635)
DNA (105bp) protein (35aa)
hypothetical protein id=75119 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein Tax=RBG_16_RIF_OP11_02_41_13_curated
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_3037_19
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(17723..20224)
DNA (2502bp) protein (834aa)
cation-transporting P-type ATPase (EC:3.6.3.2); K01531 Mg2+-importing ATPase [EC:3.6.3.2] Tax=RBG_16_RIF_OP11_02_41_13_curated
cpy:Cphy_1804 ATPase, P-type (transporting), HAD superfamily, subfamily IC id=75124 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_3037_20
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(20221..21207)
DNA (987bp) protein (329aa)
MgtE integral membrane region id=75125 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
magnesium transporter; K06213 magnesium transporter Tax=RBG_16_RIF_OP11_02_41_13_curated
Magnesium transporter mgtE
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_3037_21
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

21249..22523
DNA (1275bp) protein (425aa)
peptidase M16 domain protein id=75122 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
peptidase M16 domain-containing protein Tax=RBG_16_RIF_OP11_02_41_13_curated
peptidase M16 domain-containing protein
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_3037_22
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

22526..23107
DNA (582bp) protein (194aa)
nucleoside diphosphate kinase (EC:2.7.4.6); K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] id=75127 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
nucleoside-diphosphate kinase; K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] Tax=RBG_16_RIF_OP11_02_41_13_curated
nucleoside-diphosphate kinase
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_3037_23
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(22929..24116)
DNA (1188bp) protein (396aa)
transmembrane_regions 282..301 id=75126 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
transmembrane_regions 282..301 Tax=RBG_16_RIF_OP11_02_41_13_curated
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_3037_24
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

24146..25675
DNA (1530bp) protein (510aa)
Serine/threonine protein kinase n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C267_9PLAN id=75128 bin=ACD52 species=Planctomyces maris genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
laminin G, domain-containing 2 Tax=RBG_16_RIF_OP11_02_41_13_curated
laminin G, domain-containing 2
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_3037_25
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(25676..26104)
DNA (429bp) protein (143aa)
seg 83..98 id=75121 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
seg 83..98 Tax=RBG_16_RIF_OP11_02_41_13_curated
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_3037_26
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(26339..26497)
DNA (159bp) protein (53aa)
Tax=RBG_16_RIF_OP11_02_41_13_curated
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_3037_27
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(26541..26675)
DNA (135bp) protein (45aa)
hypothetical protein id=75120 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein Tax=RBG_16_RIF_OP11_02_41_13_curated
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_3037_28
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(27231..28397)
DNA (1167bp) protein (389aa)
Serine/threonine protein kinase n=1 Tax=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) RepID=C5A5F8_THEGJ id=5087008 bin=GWF1_OP11_31_35_complete species=Thermococcus gammatolerans genus=Thermococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota tax=GWF1_OP11_31_35_complete organism_group=OP11 (Microgenomates) organism_desc=Complete genome (was OP11_1)
Serine/threonine protein kinase Tax=RBG_16_RIF_OP11_02_41_13_curated
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_3037_29
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

28472..29476
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2F499_9BACT
MreB/Mrl family cell shape determining protein; K03569 rod shape-determining protein MreB and related proteins Tax=RBG_16_RIF_OP11_02_41_13_curated
MreB/Mrl family cell shape determining protein
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_3037_30
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

29809..30651
DNA (843bp) protein (281aa)
UDP-N-acetyl-D-mannosamine transferase; K05946 N-acetylglucosaminyldiphosphoundecaprenol [EC:2.4.1.187] Tax=RBG_16_RIF_OP11_02_41_13_curated
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K2CWV5_9BACT
UDP-N-acetyl-D-mannosamine transferase
Displaying items 1-30 of 57 in total

View Taxonomy