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RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_rifcsphigho2_02_scaffold_11348

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_rifcsphigho2_02_scaffold_11348_1
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

comp(1..672)
DNA (672bp) protein (224aa)
Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_rifcsphigho2_02_scaffold_11348_2
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

comp(739..1848)
DNA (1110bp) protein (370aa)
Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_rifcsphigho2_02_scaffold_11348_3
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

1949..2122
DNA (174bp) protein (58aa)
Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_rifcsphigho2_02_scaffold_11348_4
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

2065..3390
DNA (1326bp) protein (442aa)
aminopeptidase P (EC:3.4.11.9); K01262 Xaa-Pro aminopeptidase [EC:3.4.11.9] Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
aminopeptidase P (EC:3.4.11.9)
Xaa-pro dipeptidase id=1842582 bin=GWA2_Elusimicrobia_66_18 species=Danaus plexippus genus=Danaus taxon_order=Lepidoptera taxon_class=Insecta phylum=Arthropoda tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_rifcsphigho2_02_scaffold_11348_5
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

3365..4540
DNA (1176bp) protein (392aa)
N-acetylmuramoyl-L-alanine amidase family 2 Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
N-acetylmuramoyl-L-alanine amidase family 2 id=4720778 bin=GWA2_Elusimicrobia_69_24 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
N-acetylmuramoyl-L-alanine amidase family 2 protein
RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_rifcsphigho2_02_scaffold_11348_6
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

comp(4387..5604)
DNA (1218bp) protein (406aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
PHP domain protein
RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_rifcsphigho2_02_scaffold_11348_7
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

comp(5594..6490)
DNA (897bp) protein (299aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
Putative uncharacterized protein id=1842456 bin=GWA2_Elusimicrobia_66_18 species=Tsukamurella paurometabola genus=Tsukamurella taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
hypothetical protein
RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_rifcsphigho2_02_scaffold_11348_8
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

6596..9238
DNA (2643bp) protein (881aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
Putative uncharacterized protein id=4720774 bin=GWA2_Elusimicrobia_69_24 species=Trichomonas vaginalis genus=Trichomonas taxon_order=Trichomonadida taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
protein of unknown function
RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_rifcsphigho2_02_scaffold_11348_9
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

9301..9579
DNA (279bp) protein (93aa)
Putative uncharacterized protein Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
Putative uncharacterized protein id=1842452 bin=GWA2_Elusimicrobia_66_18 species=Leptospirillum ferrodiazotrophum genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_rifcsphigho2_02_scaffold_11348_10
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

comp(9596..10447)
DNA (852bp) protein (284aa)
short-chain dehydrogenase/reductase SDR Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
Short-chain dehydrogenase/reductase SDR id=4968598 bin=GWA2_Elusimicrobia_69_24 species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
short-chain dehydrogenase/reductase SDR
RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_rifcsphigho2_02_scaffold_11348_11
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

comp(10447..11211)
DNA (765bp) protein (255aa)
enoyl-CoA hydratase/carnithine racemase Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
Short chain enoyl-CoA hydratase id=4968597 bin=GWA2_Elusimicrobia_69_24 species=unknown genus=unknown taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
enoyl-CoA hydratase/carnithine racemase
RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_rifcsphigho2_02_scaffold_11348_12
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

comp(11216..11665)
DNA (450bp) protein (150aa)
twitching motility protein; K02669 twitching motility protein PilT Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
Pili biogenesis protein ATPase id=1842442 bin=GWA2_Elusimicrobia_66_18 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
twitching motility protein
RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_rifcsphigho2_02_scaffold_11348_13
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

comp(11622..12221)
DNA (600bp) protein (200aa)
twitching motility protein PilT; K02669 twitching motility protein PilT Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
Pili biogenesis protein ATPase id=1842442 bin=GWA2_Elusimicrobia_66_18 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
twitching motility protein PilT
RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_rifcsphigho2_02_scaffold_11348_14
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

12263..13186
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SMR4_THEM7
hypothetical protein; K07071 Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
hypothetical protein
RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_rifcsphigho2_02_scaffold_11348_trna_1
unknown

Not on your lists

13241..13312
DNA (72bp)
transferRNA
RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_rifcsphigho2_02_scaffold_11348_15
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

comp(13568..13834)
DNA (267bp) protein (89aa)
id=14626989 Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
id=14626989 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_rifcsphigho2_02_scaffold_11348_16
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

comp(13831..14130)
DNA (300bp) protein (100aa)
Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_rifcsphigho2_02_scaffold_11348_17
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

14273..14977
DNA (705bp) protein (235aa)
Transcriptional regulator n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PMW6_DESSD
transcriptional regulator Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
transcriptional regulator
RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_rifcsphigho2_02_scaffold_11348_18
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

14964..15962
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=Desulfobacter curvatus RepID=UPI00036807F7
ABC transporter Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
ABC transporter
RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_rifcsphigho2_02_scaffold_11348_19
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

15949..16176
DNA (228bp) protein (76aa)
Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_rifcsphigho2_02_scaffold_11348_20
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

16209..16421
DNA (213bp) protein (71aa)
Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_rifcsphigho2_02_scaffold_11348_21
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

16483..16899
DNA (417bp) protein (139aa)
protein-tyrosine phosphatase Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
protein-tyrosine phosphatase id=24426365 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Dyella japonica genus=Dyella taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
protein-tyrosine phosphatase
RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_rifcsphigho2_02_scaffold_11348_22
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

comp(16859..17083)
DNA (225bp) protein (75aa)
Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_rifcsphigho2_02_scaffold_11348_23
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

17702..17938
DNA (237bp) protein (79aa)
Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_rifcsphigho2_02_scaffold_11348_24
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

18426..19088
DNA (663bp) protein (221aa)
D-Ala-D-Ala dipeptidase (EC:3.4.13.22); K08641 D-alanyl-D-alanine dipeptidase [EC:3.4.13.22] Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
D-Ala-D-Ala dipeptidase n=1 Tax=Desulfovibrio aespoeensis (strain ATCC 700646 / DSM 10631 / Aspo-2) RepID=E6VWS4_DESAO
D-alanyl-D-alanine dipeptidase
RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_rifcsphigho2_02_scaffold_11348_25
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

comp(19090..19476)
DNA (387bp) protein (129aa)
response regulator receiver sensor signal transduction histidine kinase Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
Phosphate regulon transcriptional regulatory protein PhoB id=4562648 bin=GWA2_Elusimicrobia_69_24 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
response regulator receiver sensor signal transduction histidine kinase
RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_rifcsphigho2_02_scaffold_11348_26
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

comp(19485..20825)
DNA (1341bp) protein (447aa)
two-component sensor histidine kinase; K07642 two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
Integral membrane sensor signal transduction histidine kinase id=4959113 bin=GWA2_Elusimicrobia_69_24 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
two-component sensor histidine kinase
Displaying 27 items

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