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RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_13579

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_13579_1
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

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188..751
DNA (564bp) protein (188aa)
DNA-3-methyladenine glycosylase; K03652 DNA-3-methyladenine glycosylase [EC:3.2.2.21] Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
Putative 3-methyladenine DNA glycosylase n=1 Tax=Coraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193 / KCTC 12865) RepID=D5EIG2_CORAD
DNA-3-methyladenine glycosylase
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_13579_2
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

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759..1016
DNA (258bp) protein (86aa)
ada; 6-O-methylguanine DNA methyltransferase (EC:2.1.1.63); K00567 methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] id=13208 bin=ACD18 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=ACD18 organism_group=OD1 (Parcubacteria) organism_desc= OD1
methylated-DNA--protein-cysteine methyltransferase Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
methylated-DNA--protein-cysteine methyltransferase
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_13579_3
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

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1070..1324
DNA (255bp) protein (85aa)
transmembrane_regions 13..35 Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
transmembrane_regions 13..35 id=67667 bin=ACD48 species=ACD48 genus=ACD48 taxon_order=ACD48 taxon_class=ACD48 phylum=OP11 tax=ACD48 organism_group=OP11 (Microgenomates) organism_desc=OP11
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_13579_4
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

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1437..3149
DNA (1713bp) protein (571aa)
transmembrane and TPR repeat-containing protein 1-like Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
Conserved hypothetical tpr repeat protein id=4838807 bin=GWC2_OD1_43_27 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
hypothetical protein
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_13579_5

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3721..6939
DNA (3219bp) protein (1073aa)
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] id=5803387 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta {ECO:0000313|EMBL:KKR45583.1}; TaxID=1618814 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_14.;"
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_13579_6

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6936..10610
DNA (3675bp) protein (1225aa)
DNA-directed RNA polymerase subunit beta'; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] id=5803388 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
DNA-directed RNA polymerase subunit beta {ECO:0000313|EMBL:KKR31311.1}; TaxID=1618963 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_39_8b.;"
DNA-directed RNA polymerase subunit beta'
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_13579_7
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

10827..11321
DNA (495bp) protein (165aa)
Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_13579_8
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

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11533..11742
DNA (210bp) protein (70aa)
Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_13579_9
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

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11757..12194
DNA (438bp) protein (146aa)
hypothetical protein Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase id=4838934 bin=GWC2_OD1_43_27 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
hypothetical protein
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_13579_10
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

12280..13269
DNA (990bp) protein (330aa)
id=4241725 Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
id=4241725 bin=GWC2_OD1_43_27 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
Displaying 10 items

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