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RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_5276

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_5276_trna_1
unknown

Not on your lists

comp(96..168)
DNA (73bp)
transferRNA
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_5276_1
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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238..381
DNA (144bp) protein (48aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_5276_2
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

403..2652
DNA (2250bp) protein (750aa)
excinuclease ABC subunit B; K03702 excinuclease ABC subunit B Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
UvrB; excinuclease ABC subunit B; K03702 excinuclease ABC subunit B id=5803633 bin=OD1_GWC2_34_28 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
excinuclease ABC subunit B
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_5276_3
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

2767..2955
DNA (189bp) protein (63aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_5276_4
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

3045..3140
DNA (96bp) protein (32aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_5276_5
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

3188..3967
DNA (780bp) protein (260aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_5276_6
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

4038..6719
DNA (2682bp) protein (894aa)
uvrA; UvrABC system protein A (UvrA protein) (Excinuclease ABC subunit A)(Excinuclease ATPase subunit) Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
id=5226936 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
uvrA; UvrABC system protein A (UvrA protein) (Excinuclease ABC subunit A)(Excinuclease ATPase subunit)
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_5276_7
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

6726..8045
DNA (1320bp) protein (440aa)
excinuclease ABC subunit C domain-containing protein; K03703 excinuclease ABC subunit C Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
UvrABC system protein C; K03703 excinuclease ABC subunit C id=5803631 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Excinuclease ABC subunit C
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_5276_8
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

8042..8518
DNA (477bp) protein (159aa)
tRNA/rRNA methyltransferase SpoU n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7Q105_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
hypothetical protein
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_5276_9
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists

comp(8526..9425)
DNA (900bp) protein (300aa)
Formamidopyrimidine-DNA glycosylase {ECO:0000313|EMBL:KKS70699.1}; TaxID=1618966 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_42_7.;"
hypothetical protein id=5801943 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
formamidopyrimidine-DNA glycosylase
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_5276_10
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

9707..11914
DNA (2208bp) protein (736aa)
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8); K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] id=5803178 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
polyribonucleotide nucleotidyltransferase Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
polyribonucleotide nucleotidyltransferase
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_5276_11
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

11970..12854
DNA (885bp) protein (295aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_5276_12
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists

comp(12858..13826)
DNA (969bp) protein (323aa)
S-adenosylmethionine synthase n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PY90_9BACT
S-adenosylmethionine synthase {ECO:0000313|EMBL:KKS70696.1}; TaxID=1618966 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_42_7.;"
hypothetical protein
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_5276_13

Not on your lists

13913..16615
DNA (2703bp) protein (901aa)
Uncharacterized protein n=1 Tax=Weeksella virosa (strain ATCC 43766 / DSM 16922 / JCM 21250 / NBRC 16016 / NCTC 11634 / CL345/78) RepID=F0NXA3_WEEVC
Uncharacterized protein {ECO:0000313|EMBL:KKR61920.1}; TaxID=1618817 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_37.;"
hypothetical protein
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_5276_14
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

16617..16838
DNA (222bp) protein (74aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
Putative uncharacterized protein id=1968700 bin=GWE2_Gammaproteobacteria_37_16 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=GWE2_Gammaproteobacteria_37_16 organism_group=Gammaproteobacteria organism_desc=Looks good, but small
hypothetical protein
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_5276_15
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

16828..16962
DNA (135bp) protein (45aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_5276_16
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(16931..17947)
DNA (1017bp) protein (339aa)
Transposase insI for insertion sequence element IS30B/C/D n=3 Tax=Coxiella burnetii RepID=A1EVR0_COXBE
transposase Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
transposase
Displaying 17 items

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