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RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_1691

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_1691_1
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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279..2051
-----------------
DNA (1773bp)
protein (591aa)
Uncharacterized protein (Fragment) Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
Uncharacterized protein (Fragment) id=2899562 bin=GWA1_ZB2_49_26 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_1691_2
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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2078..2452
-----------------
DNA (375bp)
protein (125aa)
id=2899561 Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
id=2899561 bin=GWA1_ZB2_49_26 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_1691_3
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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2527..3885
-----------------
DNA (1359bp)
protein (453aa)
transmembrane_regions Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
transmembrane_regions id=5226885 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_1691_4
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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3959..4321
-----------------
DNA (363bp)
protein (121aa)
Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7BWW0_9GAMM id=130483 bin=ACD7 species=Beggiatoa sp. PS genus=Beggiatoa taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
S23 ribosomal protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
S23 ribosomal protein
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_1691_5
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

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comp(4653..5933)
-----------------
DNA (1281bp)
protein (427aa)
Retron-type reverse transcriptase {ECO:0000313|EMBL:KKS71603.1}; TaxID=1618966 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_42_7.;"
Retron-type reverse transcriptase id=2169465 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
Retron-type reverse transcriptase
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_1691_6
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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6103..6627
-----------------
DNA (525bp)
protein (175aa)
Transposase n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UVJ0_CLOBO id=96731 bin=ACD63 species=Clostridium botulinum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
transposase Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
transposase
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_1691_7
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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7200..7802
-----------------
DNA (603bp)
protein (201aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PY45_9BACT
transcriptional regulator
Uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_1691_8

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7983..8687
-----------------
DNA (705bp)
protein (235aa)
Conserved TM helix {ECO:0000313|EMBL:KKR62507.1}; TaxID=1618817 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_37.;"
Small-conductance mechanosensitive ion channel-like protein id=5226871 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
TM helix protein
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_1691_9
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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8809..10053
-----------------
DNA (1245bp)
protein (415aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-N16 RepID=UPI0003B37C98
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_1691_trna_1
unknown

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10337..10407
-----------------
DNA (71bp)
transferRNA
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_1691_10
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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comp(10396..10704)
-----------------
DNA (309bp)
protein (103aa)
hypothetical protein; K09131 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
hypothetical protein; K09131 hypothetical protein id=5803615 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_1691_11
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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comp(10772..11707)
-----------------
DNA (936bp)
protein (312aa)
matrixin superfamily Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
Peptidase M10A and M12B matrixin and adamalysin id=1831174 bin=GWA2_Elusimicrobia_51_34 species=Acinetobacter pittii genus=Acinetobacter taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_51_34 organism_group=Elusimicrobia
matrixin superfamily
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_1691_12
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

comp(11775..13448)
-----------------
DNA (1674bp)
protein (558aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS12030.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
general secretion pathway protein G; K02456 general secretion pathway protein G id=6090 bin=ACD13 species=ACD13 genus=ACD13 taxon_order=ACD13 taxon_class=ACD13 phylum=OP11 tax=ACD13 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_1691_13
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

comp(13466..13609)
-----------------
DNA (144bp)
protein (48aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS12029.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_1691_14
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

comp(13646..13960)
-----------------
DNA (315bp)
protein (105aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS12028.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_1691_15
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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comp(14262..14456)
-----------------
DNA (195bp)
protein (65aa)
Integrase core domain protein n=1 Tax=Neisseria sicca ATCC 29256 RepID=C6M834_NEISI
Integrase core domain protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_1691_16
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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14504..15247
-----------------
DNA (744bp)
protein (248aa)
Uncharacterized protein n=1 Tax=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) RepID=A7HM60_FERNB
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
hypothetical protein
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_1691_17
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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15244..16407
-----------------
DNA (1164bp)
protein (388aa)
Lipoprotein, putative n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9H3F9_9SPHI
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
hypothetical protein
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_1691_18
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

16530..16919
-----------------
DNA (390bp)
protein (130aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I8XNS0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KKS12024.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
putative diacylglycerol kinase
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_1691_19
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists

16928..17320
-----------------
DNA (393bp)
protein (131aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00037ADF7A
Vitamin K epoxide reductase {ECO:0000313|EMBL:KKS71616.1}; TaxID=1618966 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_42_7.;"
hypothetical protein
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_1691_20
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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17434..17982
-----------------
DNA (549bp)
protein (183aa)
Disulfide bond formation protein DsbB n=1 Tax=uncultured bacterium RepID=K2ECC3_9BACT
disulfide bond formation protein DsbB; K03611 disulfide bond formation protein DsbB Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
disulfide bond formation protein DsbB
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_1691_21
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


18073..18429
-----------------
DNA (357bp)
protein (119aa)
30S ribosomal protein S19 n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PZF6_9BACT
rpsS; ribosomal protein S19 (BS19) Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
rpsS; ribosomal protein S19 (BS19)
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_1691_22
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists


18557..18961
-----------------
DNA (405bp)
protein (135aa)
50S ribosomal protein L22 n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PWS5_9BACT
50S ribosomal protein L22 {ECO:0000313|EMBL:KKS70820.1}; TaxID=1618966 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_42_7.;"
rplV; 50S ribosomal protein L22
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_1691_23

Not on your lists


18963..19628
-----------------
DNA (666bp)
protein (222aa)
30S ribosomal protein S3 n=1 Tax=uncultured organism RepID=U3GQ93_9ZZZZ
30S ribosomal protein S3 {ECO:0000313|EMBL:KKR62521.1}; TaxID=1618817 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_37.;"
rpsC; 30S ribosomal protein S3
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_1691_24
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists


19704..20132
-----------------
DNA (429bp)
protein (143aa)
50S ribosomal protein L16 {ECO:0000313|EMBL:KKS12019.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 id=5227346 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
rplP; 50S ribosomal protein L16
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_1691_25
R_OD1_Nomurabacteria_40_18, Nomurabacteria, Parcubacteria, Bacteria

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20240..20383
-----------------
DNA (144bp)
protein (48aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Nomurabacteria_40_18_curated
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_1691_26
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists


20385..20642
-----------------
DNA (258bp)
protein (86aa)
30S ribosomal protein S17 {ECO:0000313|EMBL:KKS70823.1}; TaxID=1618966 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_42_7.;"
30S ribosomal protein S17; K02961 small subunit ribosomal protein S17 id=5803320 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
rpsQ; 30S ribosomal protein S17
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_1691_27

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20639..21010
-----------------
DNA (372bp)
protein (124aa)
50S ribosomal protein L14 {ECO:0000313|EMBL:KKR62524.1}; TaxID=1618817 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_37.;"
rplN; 50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 id=5227344 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
rplN; 50S ribosomal protein L14
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_1691_28
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists


21039..21254
-----------------
DNA (216bp)
protein (72aa)
50S ribosomal protein L24 n=1 Tax=Mycoplasma sp. CAG:776 RepID=R7NG34_9MOLU
50S ribosomal protein L24 {ECO:0000313|EMBL:KKS70825.1}; TaxID=1618966 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_42_7.;"
rplX; 50S ribosomal subunit protein L24
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_1691_29
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists


21310..21873
-----------------
DNA (564bp)
protein (188aa)
50S ribosomal protein L5 {ECO:0000313|EMBL:KKS70826.1}; TaxID=1618966 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_42_7.;"
50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 id=5227342 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
rplE; 50S ribosomal protein L5
Displaying items 1-30 of 43 in total

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