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RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_7630

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_7630_1
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

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2..316
DNA (315bp) protein (105aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS71239.1}; Flags: Fragment;; TaxID=1618966 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_42_7.;"
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_7630_2
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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795..1010
DNA (216bp) protein (72aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_7630_3
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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1446..3602
DNA (2157bp) protein (719aa)
chromosome segregation protein SMC; K03529 chromosome segregation protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
Chromosome partition protein smc (Fragment) id=5226912 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
chromosome segregation protein SMC
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_7630_4
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

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3639..3908
DNA (270bp) protein (90aa)
DNA polymerase, beta domain protein region n=1 Tax=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) RepID=A3CUJ5_METMJ
Polymerase, beta domain protein region protein {ECO:0000313|EMBL:KKS10852.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
DNA polymerase beta subunit
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_7630_5
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

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4031..4669
DNA (639bp) protein (213aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS10853.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
id=4241725 bin=GWC2_OD1_43_27 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_7630_6

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comp(4672..5805)
DNA (1134bp) protein (378aa)
hypothetical protein n=1 Tax=Geitlerinema sp. PCC 7105 RepID=UPI0003460544
Uncharacterized protein {ECO:0000313|EMBL:KKR61712.1}; TaxID=1618817 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_37.;"
capsule synthesis protein CapA
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_7630_7
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

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comp(5792..7732)
DNA (1941bp) protein (647aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS10855.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
Capsule synthesis protein, CapA id=5226914 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
putative poly-gamma-glutamate biosynthesis enzyme
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_7630_8
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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comp(7729..9768)
DNA (2040bp) protein (680aa)
ribonuclease R; K12573 ribonuclease R [EC:3.1.-.-] Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
id=5226915 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
ribonuclease R
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_7630_9
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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comp(9784..10332)
DNA (549bp) protein (183aa)
phaN; repressor; K02616 phenylacetic acid degradation operon negative regulatory protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
PaaX-like, C-terminal id=5227093 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
phaN; repressor
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_7630_10
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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10460..12367
DNA (1908bp) protein (636aa)
dnaK; molecular chaperone DnaK; K04043 molecular chaperone DnaK Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
id=5227092 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
dnaK; molecular chaperone DnaK
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_7630_11
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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comp(12405..13436)
DNA (1032bp) protein (344aa)
agmatine deiminase (EC:3.5.3.12) Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
agmatine deiminase (EC:3.5.3.12)
id=5227082 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_7630_12
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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comp(13444..14361)
DNA (918bp) protein (306aa)
peptidyl-arginine deiminase; K10536 agmatine deiminase [EC:3.5.3.12] Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PW26_9BACT
peptidyl-arginine deiminase
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_7630_13
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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comp(14380..15402)
DNA (1023bp) protein (341aa)
deoxyhypusine synthase; K00809 deoxyhypusine synthase [EC:2.5.1.46] Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
Deoxyhypusine synthase id=3730390 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
deoxyhypusine synthase
Displaying 13 items

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