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rifcsphigho2_02_scaffold_22969

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Displaying 23 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_22969_1
R_WOR_1_46_20, WOR-1, Bacteria

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1..684
DNA (684bp) protein (228aa)
citrate transporter Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Putative uncharacterized protein id=4281989 bin=GWF2_OP3_43_52 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
citrate transporter
rifcsphigho2_02_scaffold_22969_2
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

681..1097
DNA (417bp) protein (139aa)
Iron-sulfur cluster assembly transcription factor IscR n=1 Tax=Clostridium novyi (strain NT) RepID=A0Q155_CLONN
BadM/Rrf2 family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
iron-sulfur cluster assembly transcription factor IscR
rifcsphigho2_02_scaffold_22969_3
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

1255..1647
DNA (393bp) protein (131aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
hypothetical protein id=99012 bin=ACD66 species=ACD66 genus=ACD66 taxon_order=ACD66 taxon_class=ACD66 phylum=OD1 tax=ACD66 organism_group=OD1 (Parcubacteria) organism_desc=OD1
hypothetical protein
rifcsphigho2_02_scaffold_22969_4
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

1688..2506
DNA (819bp) protein (273aa)
Putative uncharacterized protein n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3ACL9_CARHZ
hypothetical protein; K06864 uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
hypothetical protein
rifcsphigho2_02_scaffold_22969_5
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

2619..3029
DNA (411bp) protein (137aa)
Transcriptional regulator, BadM/Rrf2 family n=1 Tax=Desulfotomaculum nigrificans DSM 574 RepID=F0DKB0_9FIRM
BadM/Rrf2 family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
BadM/Rrf2 family transcriptional regulator
rifcsphigho2_02_scaffold_22969_6
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

3026..4213
DNA (1188bp) protein (396aa)
cysteine desulfurase NifS; K04487 cysteine desulfurase [EC:2.8.1.7] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
cysteine desulfurase NifS (EC:2.8.1.7)
Cysteine desulfurase n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S3B4_THEOJ
rifcsphigho2_02_scaffold_22969_7
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

4215..4649
DNA (435bp) protein (145aa)
FeS cluster assembly scaffold protein NifU Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Iron-sulfur cofactor synthesis protein id=3376731 bin=GWF2_OP9_related_35_9 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
FeS cluster assembly scaffold protein NifU
rifcsphigho2_02_scaffold_22969_8
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

4639..5541
DNA (903bp) protein (301aa)
permease; K07089 Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Heavy metal-associated domain protein id=4684786 bin=GWA2_OP3_53_43 species=Tannerella forsythia genus=Tannerella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
permease
rifcsphigho2_02_scaffold_22969_9
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

5567..6589
DNA (1023bp) protein (341aa)
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61); K00566 tRNA-specific 2-thiouridylase [EC:2.8.1.-] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F3ZX93_MAHA5
rifcsphigho2_02_scaffold_22969_10
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

6567..7484
DNA (918bp) protein (306aa)
quinolinate synthetase (EC:4.1.99.-); K03517 quinolinate synthase [EC:2.5.1.72] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
dly:Dehly_0133 quinolinate synthetase complex subunit A; K03517 quinolinate synthase [EC:2.5.1.72] id=1242313 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
quinolinate synthetase (EC:4.1.99.-)
rifcsphigho2_02_scaffold_22969_11
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(7538..7786)
DNA (249bp) protein (83aa)
Fis family two component sigma-54 specific transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
rifcsphigho2_02_scaffold_22969_trna_1
unknown

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7881..7954
DNA (74bp)
transferRNA
rifcsphigho2_02_scaffold_22969_12
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

7967..8281
DNA (315bp) protein (105aa)
Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
rifcsphigho2_02_scaffold_22969_13
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

8287..9660
DNA (1374bp) protein (458aa)
MesJ3; ATPase; K04075 tRNA(Ile)-lysidine synthase [EC:6.3.4.19] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
tilS; tRNA(Ile)-lysidine synthase TilS (EC:6.3.4.19)
hypothetical protein n=1 Tax=Orenia marismortui RepID=UPI00037D633F
rifcsphigho2_02_scaffold_22969_14
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

9657..10856
DNA (1200bp) protein (400aa)
dihydropteroate synthase (EC:2.5.1.15); K00796 dihydropteroate synthase [EC:2.5.1.15] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
dihydropteroate synthase (EC:2.5.1.15)
Dihydropteroate synthase n=1 Tax=Desulfotomaculum nigrificans DSM 574 RepID=F0DPG9_9FIRM
rifcsphigho2_02_scaffold_22969_15
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

10849..11505
DNA (657bp) protein (219aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:2.7.6.3); K00950 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:2.7.6.3)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F3ZVJ8_MAHA5
rifcsphigho2_02_scaffold_22969_16
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

11499..11933
DNA (435bp) protein (145aa)
ATPase YjeE, predicted to have essential role in cell wall biosynthesis n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CDP3_9CLOT
hypothetical protein; K06925 UPF0079 ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
ATP/GTP hydrolase
rifcsphigho2_02_scaffold_22969_17
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

11894..12514
DNA (621bp) protein (207aa)
Universal protein YeaZ n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CN19_DESK7
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
hypothetical protein
rifcsphigho2_02_scaffold_22969_18
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

12533..12946
DNA (414bp) protein (138aa)
ribosomal-protein-alanine acetyltransferase; K03789 ribosomal-protein-alanine N-acetyltransferase [EC:2.3.1.128] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Ribosomal-protein-alanine acetyltransferase n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MG04_9FIRM
ribosomal-protein-alanine acetyltransferase
rifcsphigho2_02_scaffold_22969_19
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

12943..15396
DNA (2454bp) protein (818aa)
methionine synthase (EC:2.1.1.13); K00548 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
methionine synthase (EC:2.1.1.13)
hypothetical protein n=1 Tax=Orenia marismortui RepID=UPI00035E9E1B
rifcsphigho2_02_scaffold_22969_20
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

15411..16352
DNA (942bp) protein (314aa)
isopropylmalate/homocitrate/citramalate synthase; K01666 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
isopropylmalate/homocitrate/citramalate synthase; K01666 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] id=24608777 bin=RAAC11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Omnitrophica tax=RAAC11 organism_group=Unknown_CP
isopropylmalate/homocitrate/citramalate synthase
rifcsphigho2_02_scaffold_22969_21
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

16382..17707
DNA (1326bp) protein (442aa)
Outer membrane efflux protein n=1 Tax=Acetonema longum DSM 6540 RepID=F7NM27_9FIRM
type I secretion outer membrane protein Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
outer membrane efflux protein
rifcsphigho2_02_scaffold_22969_22
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

17707..18087
DNA (381bp) protein (127aa)
RND family efflux transporter MFP subunit Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Displaying 23 items

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