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rifcsphigho2_02_scaffold_2293

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Displaying items 1-30 of 34 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_2293_1
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

2..820
DNA (819bp) protein (273aa)
Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
rifcsphigho2_02_scaffold_2293_2
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(1200..1496)
DNA (297bp) protein (99aa)
IstB transposition helper protein n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9RYE8_THEOJ
IstB transposition helper protein Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
IstB transposition helper protein
rifcsphigho2_02_scaffold_2293_3
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(1510..1995)
DNA (486bp) protein (162aa)
Isrso6-transposase orfb protein n=1 Tax=Ralstonia solanacearum (strain GMI1000) RepID=Q8XG57_RALSO
tISRso6b; transposase/IS protein Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
tISRso6b; transposase/IS protein
rifcsphigho2_02_scaffold_2293_4
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

2638..3792
DNA (1155bp) protein (385aa)
AAA+ superfamily protein n=1 Tax=uncultured bacterium RepID=K2B9B6_9BACT
atpase; K07133 Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
uncharacterized protein
rifcsphigho2_02_scaffold_2293_5
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

3969..5006
DNA (1038bp) protein (346aa)
AroC; chorismate synthase (EC:4.2.3.5); K01736 chorismate synthase [EC:4.2.3.5] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
AroC; chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=2 Tax=Caldanaerobacter subterraneus RepID=AROC_THETN
rifcsphigho2_02_scaffold_2293_6
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists


5061..5486
DNA (426bp) protein (142aa)
30S ribosomal protein S16 n=2 Tax=Leuconostoc mesenteroides subsp. mesenteroides RepID=RS16_LEUMM
30S ribosomal protein S16P; K02959 small subunit ribosomal protein S16 Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Ribosomal protein S16
rifcsphigho2_02_scaffold_2293_7
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

5483..5761
DNA (279bp) protein (93aa)
nucleic acid binding protein; K06960 Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
UPF0109 protein CcarbDRAFT_1215 id=3524823 bin=GWF2_OP9_related_35_9 species=Clostridium perfringens genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
nucleic acid binding protein
rifcsphigho2_02_scaffold_2293_8
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

5730..6164
DNA (435bp) protein (145aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Putative uncharacterized protein id=1992737 bin=GWD2_RBX1-related_39_127 species=Stanieria cyanosphaera genus=Stanieria taxon_order=Pleurocapsales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
hypothetical protein
rifcsphigho2_02_scaffold_2293_9
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

6192..7409
DNA (1218bp) protein (406aa)
trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31); K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31)
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Deferribacter desulfuricans (strain DSM 14783 / JCM 11476 / NBRC 101012 / SSM1) RepID=D3PAY6_DEFDS
rifcsphigho2_02_scaffold_2293_10
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists


7427..7774
DNA (348bp) protein (116aa)
50S ribosomal protein L19 n=2 Tax=Caldanaerobacter subterraneus RepID=RL19_THETN
rplS; 50S ribosomal protein L19; K02884 large subunit ribosomal protein L19 Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
rplS; 50S ribosomal protein L19
rifcsphigho2_02_scaffold_2293_11
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

7780..8295
DNA (516bp) protein (172aa)
signal peptidase I; K03100 signal peptidase I [EC:3.4.21.89] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
signal peptidase I (EC:3.4.21.89)
Signal peptidase I n=1 Tax=Thermovirga lienii (strain ATCC BAA-1197 / DSM 17291 / Cas60314) RepID=G7V823_THELD
rifcsphigho2_02_scaffold_2293_12
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

8310..8894
DNA (585bp) protein (195aa)
rnhB; ribonuclease HII RnhB (EC:3.1.26.4) Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
rnhB; ribonuclease HII RnhB (EC:3.1.26.4)
hypothetical protein n=1 Tax=Nitrospina sp. AB-629-B06 RepID=UPI00037B1C3E
rifcsphigho2_02_scaffold_2293_13
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(8851..9786)
DNA (936bp) protein (312aa)
aspartate carbamoyltransferase (EC:2.1.3.2); K00609 aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
pyrB; aspartate carbamoyltransferase (EC:2.1.3.2); K00609 aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] id=24609777 bin=RAAC11 species=Dictyoglomus thermophilum genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=RAAC11 organism_group=Unknown_CP
aspartate carbamoyltransferase (EC:2.1.3.2)
rifcsphigho2_02_scaffold_2293_14
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

9834..10622
DNA (789bp) protein (263aa)
thiamine biosynthesis protein ApbE n=1 Tax=Humibacter albus RepID=UPI0003B3A6C3
ApbE family lipoprotein; K03734 thiamine biosynthesis lipoprotein Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
ApbE family lipoprotein
rifcsphigho2_02_scaffold_2293_15
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

10594..11814
DNA (1221bp) protein (407aa)
acetate kinase (EC:2.7.2.1); K00925 acetate kinase [EC:2.7.2.1] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
propionate kinase (EC:2.7.2.15)
Acetate kinase n=2 Tax=Geobacter metallireducens RepID=ACKA_GEOMG
rifcsphigho2_02_scaffold_2293_16
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

11818..12639
DNA (822bp) protein (274aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Nucleoside-diphosphate-sugar pyrophosphorylase id=2161498 bin=GWE2_RBX1_39_32 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein
rifcsphigho2_02_scaffold_2293_17
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(12632..16057)
DNA (3426bp) protein (1142aa)
Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
rifcsphigho2_02_scaffold_2293_trna_1
unknown

Not on your lists

16106..16176
DNA (71bp)
transferRNA
rifcsphigho2_02_scaffold_2293_18
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

16251..16883
DNA (633bp) protein (211aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
hypothetical protein
rifcsphigho2_02_scaffold_2293_19
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(16930..17658)
DNA (729bp) protein (243aa)
Methylase involved in ubiquinone/menaquinone biosynthesis Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Methylase involved in ubiquinone/menaquinone biosynthesis id=4419648 bin=GWF2_Ignavibacteria_35_20 species=Butyrivibrio fibrisolvens genus=Butyrivibrio taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
Methylase involved in ubiquinone/menaquinone biosynthesis
rifcsphigho2_02_scaffold_2293_20
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

17680..18495
DNA (816bp) protein (272aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Hypothetical membrane protein id=2868900 bin=GWF2_OP9_related_35_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
hypothetical protein
rifcsphigho2_02_scaffold_2293_21
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

18535..20757
DNA (2223bp) protein (741aa)
DNA translocase FtsK; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
DNA translocase FtsK/SpoIIIE id=2149054 bin=GWD2_RBX1-related_39_127 species=Clostridiaceae bacterium L21-TH-D2 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
DNA translocase FtsK
rifcsphigho2_02_scaffold_2293_22
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

20764..21615
DNA (852bp) protein (284aa)
hypothetical protein; K09116 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
hypothetical protein; K09116 hypothetical protein id=24608953 bin=RAAC11 species=Thermodesulfobacterium geofontis genus=Thermodesulfobacterium taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=RAAC11 organism_group=Unknown_CP
hypothetical protein
rifcsphigho2_02_scaffold_2293_23
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

21699..22448
DNA (750bp) protein (250aa)
Periplasmic binding protein n=1 Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CND8_SYNLT
periplasmic binding protein; K02016 iron complex transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
periplasmic binding protein
rifcsphigho2_02_scaffold_2293_24
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

22476..23459
DNA (984bp) protein (328aa)
Transport system permease protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GDX9_9FIRM
transport system permease; K02015 iron complex transport system permease protein Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
transport system permease
rifcsphigho2_02_scaffold_2293_25
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

23456..24229
DNA (774bp) protein (258aa)
ABC transporter; K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
ABC transporter related protein n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QVQ0_ACEAZ
ABC transporter
rifcsphigho2_02_scaffold_2293_26
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(24211..25059)
DNA (849bp) protein (283aa)
branched-chain-amino-acid aminotransferase ; K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Branched-chain amino acid aminotransferase id=2255999 bin=GWA2_OP3_53_43 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
branched-chain-amino-acid aminotransferase
rifcsphigho2_02_scaffold_2293_27
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(25067..26683)
DNA (1617bp) protein (539aa)
Carbon starvation protein CstA n=1 Tax=Prosthecochloris vibrioformis (strain DSM 265) RepID=A4SFM1_PROVI
carbon starvation protein CstA; K06200 carbon starvation protein Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
carbon starvation protein CstA
rifcsphigho2_02_scaffold_2293_28
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(26686..26943)
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=Eudoraea adriatica RepID=UPI000360CDEB
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
hypothetical protein
rifcsphigho2_02_scaffold_2293_29
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

26994..27794
DNA (801bp) protein (267aa)
hypothetical protein n=1 Tax=Nitrospina sp. SCGC AAA288-L16 RepID=UPI000367B139
family 2 glycosyl transferase Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
family 2 glycosyl transferase
Displaying items 1-30 of 34 in total

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