ggKbase home page

RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_12173

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_12173_1
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(102..392)
DNA (291bp) protein (97aa)
Membrane metal-binding protein id=4940896 bin=GWC2_Alphaproteobacteria_42_16 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
Membrane metal-binding protein Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_12173_2
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(581..2098)
DNA (1518bp) protein (506aa)
Methionine--tRNA ligase id=4940897 bin=GWC2_Alphaproteobacteria_42_16 species=Tistrella mobilis genus=Tistrella taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
metG; methionyl-tRNA synthetase Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
metG; methionyl-tRNA synthetase
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_12173_3
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2103..3035)
DNA (933bp) protein (311aa)
DNA polymerase III subunit delta' (EC:2.7.7.7); K02341 DNA polymerase III subunit delta' [EC:2.7.7.7] Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
DNA polymerase III subunit delta' (EC:2.7.7.7)
ATPase involved in DNA replication id=4940898 bin=GWC2_Alphaproteobacteria_42_16 species=unknown genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_12173_4
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3205..3708)
DNA (504bp) protein (168aa)
id=4940899 bin=GWC2_Alphaproteobacteria_42_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
id=4940899 Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_12173_5
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3841..4962)
DNA (1122bp) protein (374aa)
Putative uncharacterized protein id=4940927 bin=GWC2_Alphaproteobacteria_42_16 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
hypothetical protein; K07133 Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
hypothetical protein
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_12173_6
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5044..6126)
DNA (1083bp) protein (361aa)
id=4940928 bin=GWC2_Alphaproteobacteria_42_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
id=4940928 Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_12173_7
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6203..6844)
DNA (642bp) protein (214aa)
tmk; thymidylate kinase; K00943 dTMP kinase [EC:2.7.4.9] Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
Thymidylate kinase id=4940929 bin=GWC2_Alphaproteobacteria_42_16 species=Azospirillum lipoferum genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
tmk; thymidylate kinase
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_12173_8
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6841..7965)
DNA (1125bp) protein (375aa)
dacA; D-alanyl-D-alanine carboxypeptidase; K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
Serine-type D-Ala-D-Ala carboxypeptidase id=4940930 bin=GWC2_Alphaproteobacteria_42_16 species=Thalassospira xiamenensis genus=Thalassospira taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
serine-type D-Ala-D-Ala carboxypeptidase
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_12173_9
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7977..8888)
DNA (912bp) protein (304aa)
Rare lipoprotein A n=1 Tax=uncultured bacterium RepID=K2EVS9_9BACT
lipoprotein; K03642 rare lipoprotein A Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
putative Rare lipoprotein A
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_12173_10
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8931..9164)
DNA (234bp) protein (78aa)
Putative uncharacterized protein id=4940932 bin=GWC2_Alphaproteobacteria_42_16 species=Legionella drancourtii genus=Legionella taxon_order=Legionellales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
XRE family transcriptional regulator; K07727 putative transcriptional regulator Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
XRE family transcriptional regulator
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_12173_11
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9178..9744)
DNA (567bp) protein (189aa)
Putative uncharacterized protein id=4940933 bin=GWC2_Alphaproteobacteria_42_16 species=Legionella drancourtii genus=Legionella taxon_order=Legionellales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
hypothetical protein
Displaying 11 items

View Taxonomy