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RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_36

Search features with annotation key words

Displaying items 1-30 of 198 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_36_1
RLO_Nitrospinae_39_16, Nitrospinae, Bacteria

Not on your lists

comp(3..128)
DNA (126bp) protein (42aa)
rhizobiocin/RTX toxin and hemolysin-type calcium binding protein Tax=RifCSPlowO2_12_Nitrospinae_39_16_curated
id=3886382 bin=GWC2_Alphaproteobacteria_42_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_36_2
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(529..2469)
DNA (1941bp) protein (647aa)
Conjugal transfer protein traG id=4908488 bin=GWC2_Alphaproteobacteria_42_16 species=unknown genus=Brucella taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
putative DNA-binding protein Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
traG; Conjugal transfer protein TraG
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_36_3

Not on your lists

comp(2457..2693)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DWN1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE10191.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_36_4
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3098..3265)
DNA (168bp) protein (56aa)
id=4908492 bin=GWC2_Alphaproteobacteria_42_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
id=4908492 Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_36_5

Not on your lists

comp(3483..4919)
DNA (1437bp) protein (479aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EL19_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE10187.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ATPase family protein
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_36_6
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5041..6195)
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EXD2_9BACT
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
Phage integrase family protein
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_36_7
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6494..6856
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EK41_9BACT
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
hypothetical protein
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_36_8
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6963..7517
DNA (555bp) protein (185aa)
Putative uncharacterized protein id=4908511 bin=GWC2_Alphaproteobacteria_42_16 species=Agrobacterium sp. ATCC 31749 genus=Agrobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
hypothetical protein
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_36_9
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7724..8344
DNA (621bp) protein (207aa)
glycerol-3-phosphate acyltransferase; K08591 glycerol-3-phosphate acyltransferase PlsY [EC:2.3.1.15] Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
Uncharacterized protein id=4908512 bin=GWC2_Alphaproteobacteria_42_16 species=Oceaniovalibus guishaninsula genus=Oceaniovalibus taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
glycerol-3-phosphate acyltransferase PlsY
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_36_10
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8307..9437
DNA (1131bp) protein (377aa)
DNA processing protein DprA, putative id=4908513 bin=GWC2_Alphaproteobacteria_42_16 species=Rhodospirillum centenum genus=Rhodospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
dprA; DNA processing protein DprA; K04096 DNA processing protein Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
dprA; DNA processing protein DprA
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_36_11
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9434..11791
DNA (2358bp) protein (786aa)
DNA topoisomerase id=4908515 bin=GWC2_Alphaproteobacteria_42_16 species=Roseomonas cervicalis genus=Roseomonas taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
topA; DNA topoisomerase I Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
DNA topoisomerase I
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_36_12
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11775..13919
DNA (2145bp) protein (715aa)
rnr; ribonuclease R; K12573 ribonuclease R [EC:3.1.-.-] Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
Ribonuclease R id=4908517 bin=GWC2_Alphaproteobacteria_42_16 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
rnr; ribonuclease R
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_36_13
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14005..15309
DNA (1305bp) protein (435aa)
Uncharacterized protein id=4908519 bin=GWC2_Alphaproteobacteria_42_16 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
hypothetical protein
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_36_14
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15318..15683)
DNA (366bp) protein (122aa)
Putative uncharacterized protein id=4908521 bin=GWC2_Alphaproteobacteria_42_16 species=Hirschia baltica genus=Hirschia taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
hypothetical protein
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_36_15
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15830..17146)
DNA (1317bp) protein (439aa)
diaminopimelate decarboxylase; K01586 diaminopimelate decarboxylase [EC:4.1.1.20] Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
Diaminopimelate decarboxylase id=4908523 bin=GWC2_Alphaproteobacteria_42_16 species=Clostridium thermocellum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
diaminopimelate decarboxylase
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_36_16
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17178..17837)
DNA (660bp) protein (220aa)
Uncharacterized protein id=4908525 bin=GWC2_Alphaproteobacteria_42_16 species=Bartonella bacilliformis genus=Bartonella taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
hypothetical protein; K13588 histidine phosphotransferase ChpT Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
hypothetical protein
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_36_17
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17955..19028
DNA (1074bp) protein (358aa)
Putative RND efflux transporter, MFP subunit id=4908527 bin=GWC2_Alphaproteobacteria_42_16 species=Azospirillum brasilense genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
putative RND efflux transporter, MFP subunit Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
hypothetical protein
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_36_18
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19025..22111
DNA (3087bp) protein (1029aa)
Multidrug efflux transporter id=4908529 bin=GWC2_Alphaproteobacteria_42_16 species=Azospirillum lipoferum genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
hydrophobic/amphiphilic exporter-1; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
RND multidrug efflux transporter
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_36_19
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22234..22398
DNA (165bp) protein (55aa)
id=4908531 bin=GWC2_Alphaproteobacteria_42_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
id=4908531 Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_36_20
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


22530..23882
DNA (1353bp) protein (451aa)
signal recognition particle protein id=4908532 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
ffh; GTPase of the signal recognition particle; K03106 signal recognition particle subunit SRP54 Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
RNA-binding protein
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_36_21

Not on your lists


23910..24398
DNA (489bp) protein (163aa)
30S ribosomal protein S16 n=1 Tax=uncultured bacterium RepID=K2EWC6_9BACT
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
rpsP; 30S ribosomal protein S16
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_36_22
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24408..24956
DNA (549bp) protein (183aa)
Ribosome maturation factor RimM id=4908536 bin=GWC2_Alphaproteobacteria_42_16 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
rimM; 16S rRNA-processing protein RimM; K02860 16S rRNA processing protein RimM Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
rimM; 16S rRNA-processing protein RimM
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_36_23
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24949..25653
DNA (705bp) protein (235aa)
trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.-); K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
tRNA (guanine-N(1)-)-methyltransferase id=4908538 bin=GWC2_Alphaproteobacteria_42_16 species=Rhodospirillum photometricum genus=Rhodospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
tRNA (guanine-N1)-methyltransferase
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_36_24
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


25665..26126
DNA (462bp) protein (154aa)
50S ribosomal protein L19 n=1 Tax=uncultured bacterium RepID=K2DVZ2_9BACT
rplS; 50S ribosomal protein L19 Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
50S ribosomal protein L19
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_36_25
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26222..28789
DNA (2568bp) protein (856aa)
ATP-dependent Clp protease ATP-binding subunit id=4908542 bin=GWC2_Alphaproteobacteria_42_16 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
clpB1; ATP-dependent chaperone; K03695 ATP-dependent Clp protease ATP-binding subunit ClpB Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
clpB1; ATP-dependent chaperone
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_36_26
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28926..29840
DNA (915bp) protein (305aa)
Molybdenum cofactor biosynthesis protein A id=4908544 bin=GWC2_Alphaproteobacteria_42_16 species=Methylophaga lonarensis genus=Methylophaga taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
pqqE_[H]; Heme d1 biosynthesis protein NirJ Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
pqqE_[H]; Heme d1 biosynthesis protein NirJ
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_36_27
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29894..33649)
DNA (3756bp) protein (1252aa)
hypothetical protein COdytL_08996 id=4908546 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
hypothetical protein
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_36_28
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33855..34433
DNA (579bp) protein (193aa)
id=4908548 bin=GWC2_Alphaproteobacteria_42_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
id=4908548 Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_36_29

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comp(34570..34902)
DNA (333bp) protein (111aa)
Ferredoxin n=1 Tax=uncultured bacterium RepID=K2DVY7_9BACT
Ferredoxin {ECO:0000313|EMBL:EKE09931.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
fdxB; 2Fe-2S ferredoxin
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_36_30
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34982..35392
DNA (411bp) protein (137aa)
hypothetical protein COdytL_13094 id=4908551 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
hypothetical protein
Displaying items 1-30 of 198 in total

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