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RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_5066

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_5066_1
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..119)
DNA (117bp) protein (39aa)
conjugal transfer relaxase TraA id=4175657 bin=GWC2_Alphaproteobacteria_42_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
conjugal transfer relaxase TraA Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_5066_2
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

380..784
DNA (405bp) protein (135aa)
id=4444420 bin=GWC2_Alphaproteobacteria_42_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
id=4444420 Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_5066_3
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

864..1073
DNA (210bp) protein (70aa)
hypothetical protein COdytL_12964 id=4444421 bin=GWC2_Alphaproteobacteria_42_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
hypothetical protein COdytL_12964 Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_5066_4
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1427..1822
DNA (396bp) protein (132aa)
id=4444423 bin=GWC2_Alphaproteobacteria_42_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
id=4444423 Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_5066_5
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1920..2102)
DNA (183bp) protein (61aa)
id=4444424 bin=GWC2_Alphaproteobacteria_42_16 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
id=4444424 Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_5066_6
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2298..3461)
DNA (1164bp) protein (388aa)
Integrase family protein id=4444425 bin=GWC2_Alphaproteobacteria_42_16 species=Dinoroseobacter shibae genus=Dinoroseobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
integrase family protein Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
hypothetical protein
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_5066_7
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4043..4306
DNA (264bp) protein (88aa)
Antitoxin of toxin-antitoxin system Phd id=4444426 bin=GWC2_Alphaproteobacteria_42_16 species=Rickettsia felis genus=Rickettsia taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
antitoxin of toxin-antitoxin system Phd Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
antitoxin of toxin-antitoxin system Phd
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_5066_8
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4306..4563
DNA (258bp) protein (86aa)
Addiction module toxin id=4444427 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
stbE; addiction module toxin Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
stbE; addiction module toxin
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_5066_9
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4762..5040
DNA (279bp) protein (93aa)
id=4444428 bin=GWC2_Alphaproteobacteria_42_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
id=4444428 Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_5066_10
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5112..6224)
DNA (1113bp) protein (371aa)
trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61); K00566 tRNA-specific 2-thiouridylase [EC:2.8.1.-] Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase id=4444429 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
thiouridylase
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_5066_11
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6290..6562)
DNA (273bp) protein (91aa)
Putative uncharacterized protein id=4444430 bin=GWC2_Alphaproteobacteria_42_16 species=Parvibaculum lavamentivorans genus=Parvibaculum taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
hypothetical protein
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_5066_12
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6564..6899)
DNA (336bp) protein (112aa)
HpcH/HpaI aldolase id=4444431 bin=GWC2_Alphaproteobacteria_42_16 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
hypothetical protein
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_5066_13
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6968..7720
DNA (753bp) protein (251aa)
hypothetical protein; K06127 ubiquinone biosynthesis methyltransferase [EC:2.1.1.201] Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
ubiE; ubiquinone biosynthesis methyltransferase UbiE (EC:2.1.1.-)
Demethylmenaquinone methyltransferase n=1 Tax=uncultured bacterium RepID=K2DWP7_9BACT
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_5066_14
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7787..8197
DNA (411bp) protein (137aa)
DnaK suppressor protein id=4444435 bin=GWC2_Alphaproteobacteria_42_16 species=Phenylobacterium zucineum genus=Phenylobacterium taxon_order=Caulobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
dnaK suppressor protein; K06204 DnaK suppressor protein Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
dnaK suppressor protein
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_5066_15
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8206..9531)
DNA (1326bp) protein (442aa)
AarF domain-containing kinase id=4444532 bin=GWC2_Alphaproteobacteria_42_16 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
Ubiquinone biosynthesis monooxygenase UbiB Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
Ubiquinone biosynthesis monooxygenase UbiB
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_5066_16

Not on your lists

comp(9537..10955)
DNA (1419bp) protein (473aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Pyruvate kinase n=1 Tax=uncultured bacterium RepID=K2EXE8_9BACT
Pyruvate kinase
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_5066_17
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11089..13935)
DNA (2847bp) protein (949aa)
Helicase domain protein id=4444534 bin=GWC2_Alphaproteobacteria_42_16 species=Methylosinus trichosporium genus=Methylosinus taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
SNF2-related protein Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SNF2-related protein
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_5066_18
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14442..14894
DNA (453bp) protein (151aa)
Integrase family protein id=4444535 bin=GWC2_Alphaproteobacteria_42_16 species=Nitrosomonas sp. genus=Nitrosomonas taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
integrase family protein Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
integrase
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_5066_19
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15027..16070
DNA (1044bp) protein (348aa)
Transposase IS4 family protein id=4444536 bin=GWC2_Alphaproteobacteria_42_16 species=Halanaerobium praevalens genus=Halanaerobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
transposase IS4 family protein Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
transposase IS4 family protein
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_5066_20
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16031..16378
DNA (348bp) protein (116aa)
id=4444537 bin=GWC2_Alphaproteobacteria_42_16 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
hypothetical protein
Displaying 20 items

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