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RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_4981

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_4981_1
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..150)
DNA (150bp) protein (50aa)
Elongation factor Tu id=4429492 bin=GWC2_Alphaproteobacteria_42_16 species=unknown genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
tuf; elongation factor Tu; K02358 elongation factor Tu Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
tuf; elongation factor Tu
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_4981_2

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comp(165..2240)
DNA (2076bp) protein (692aa)
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
elongation factor G id=4429494 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
fusA; elongation factor G
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_4981_3
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2256..2726)
DNA (471bp) protein (157aa)
30S ribosomal protein S7 (EC:2.7.13.3); K02992 small subunit ribosomal protein S7 Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
30S ribosomal protein S7 id=4429496 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Puniceispirillum marinum genus=Candidatus Puniceispirillum taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
rpsG; 30S ribosomal subunit protein S7
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_4981_4
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2739..3110)
DNA (372bp) protein (124aa)
30S ribosomal protein S12 id=4429498 bin=GWC2_Alphaproteobacteria_42_16 species=unknown genus=unknown taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
30S ribosomal protein S12
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_4981_5
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3472..3816
DNA (345bp) protein (115aa)
id=4429500 bin=GWC2_Alphaproteobacteria_42_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
id=4429500 Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_4981_6
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4048..4302
DNA (255bp) protein (85aa)
Antitoxin yefM id=4429501 bin=GWC2_Alphaproteobacteria_42_16 species=Xenococcus sp. PCC 7305 genus=Xenococcus taxon_order=Pleurocapsales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
prevent-host-death family protein Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
prevent-host-death family protein
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_4981_7

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4331..4585
DNA (255bp) protein (85aa)
Addiction module antitoxin id=4429503 bin=GWC2_Alphaproteobacteria_42_16 species=Xenococcus sp. PCC 7305 genus=Xenococcus taxon_order=Pleurocapsales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
Addiction module antitoxin {ECO:0000313|EMBL:EKE10492.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Txe/YoeB family addiction module toxin
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_4981_8
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4633..8808)
DNA (4176bp) protein (1392aa)
DNA-directed RNA polymerase id=4429505 bin=GWC2_Alphaproteobacteria_42_16 species=unknown genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
rpoC; RNA polymerase, beta prime subunit Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
DNA-directed RNA polymerase subunit beta'
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_4981_9
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8875..13047)
DNA (4173bp) protein (1391aa)
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
rpoB; RNA polymerase, beta subunit (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta id=4429538 bin=GWC2_Alphaproteobacteria_42_16 species=Magnetospirillum gryphiswaldense genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_4981_10
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(13171..13551)
DNA (381bp) protein (127aa)
50S ribosomal protein L7/L12 id=4429539 bin=GWC2_Alphaproteobacteria_42_16 species=Roseibium sp. TrichSKD4 genus=Roseibium taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
rplL; 50S ribosomal protein L7/L12; K02935 large subunit ribosomal protein L7/L12 Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
rplL; 50S ribosomal protein L7/L12
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_4981_11
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(13584..14093)
DNA (510bp) protein (170aa)
50S ribosomal protein L10 id=4429541 bin=GWC2_Alphaproteobacteria_42_16 species=Rhodospirillum centenum genus=Rhodospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
rplJ; 50S ribosomal protein L10; K02864 large subunit ribosomal protein L10 Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
rplJ; 50S ribosomal subunit protein L10
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_4981_12

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comp(14341..15033)
DNA (693bp) protein (231aa)
50S ribosomal protein L1 n=1 Tax=uncultured bacterium RepID=K2EJU3_9BACT
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
50S ribosomal protein L1
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_4981_13

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comp(15040..15468)
DNA (429bp) protein (143aa)
50S ribosomal protein L11 id=4429545 bin=GWC2_Alphaproteobacteria_42_16 species=Caenispirillum salinarum genus=Caenispirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
50S ribosomal protein L11
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_4981_14

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comp(15539..16075)
DNA (537bp) protein (179aa)
Transcription termination/antitermination protein NusG n=1 Tax=uncultured bacterium RepID=K2DX93_9BACT
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bact
nusG; component in transcription antitermination
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_4981_15
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16083..16280)
DNA (198bp) protein (66aa)
Preprotein translocase subunit SecE id=4429549 bin=GWC2_Alphaproteobacteria_42_16 species=Tistrella mobilis genus=Tistrella taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
preprotein translocase subunit SecE Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
preprotein translocase subunit SecE
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_4981_16
unknown

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16884..16946
DNA (63bp) protein (21aa)

This feature has no annotations

Displaying 16 items

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