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RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_1001

Search features with annotation key words

Displaying items 1-30 of 82 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_1001_1
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(370..1116)
DNA (747bp) protein (249aa)
hypothetical protein; K09807 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
Putative uncharacterized protein id=1897378 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
hypothetical protein
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_1001_2
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

1532..1762
DNA (231bp) protein (77aa)
transmembrane_regions 21..43 Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
transmembrane_regions 21..43 id=129873 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_1001_3
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

1838..2638
DNA (801bp) protein (267aa)
ATP synthase F0 subunit A; K02108 F-type H+-transporting ATPase subunit a [EC:3.6.3.14] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-J21 RepID=UPI0003690236
ATP synthase F0 subunit A
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_1001_4
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

2786..3004
DNA (219bp) protein (73aa)
putative F0F1-type ATPase subunit C ; K02110 F-type H+-transporting ATPase subunit c [EC:3.6.3.14] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-J21 RepID=UPI00037AEBFC
putative F0F1-type ATPase subunit C
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_1001_5
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

3076..3636
DNA (561bp) protein (187aa)
ATP synthase F0 subunit B; K02109 F-type H+-transporting ATPase subunit b [EC:3.6.3.14] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
ATP synthase subunit b id=2008898 bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
ATP synthase F0 subunit B
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_1001_6
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

3633..4034
DNA (402bp) protein (134aa)
atpH1; ATP synthase F1 subunit delta (EC:3.6.3.14); K02113 F-type H+-transporting ATPase subunit delta [EC:3.6.3.14] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
atpH1; ATP synthase F1 subunit delta (EC:3.6.3.14)
ATP synthase subunit delta n=1 Tax=Clostridium sp. CAG:138 RepID=R6AI17_9CLOT
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_1001_7
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

4036..5556
DNA (1521bp) protein (507aa)
ATP synthase F1 subunit alpha (EC:3.6.3.14); K02111 F-type H+-transporting ATPase subunit alpha [EC:3.6.3.14] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
ttr:Tter_0065 ATP synthase F1, alpha subunit (EC:3.6.3.14); K02111 F-type H+-transporting ATPase subunit alpha [EC:3.6.3.14] id=2712 bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i
ATP synthase F1 subunit alpha (EC:3.6.3.14)
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_1001_8
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

5623..6519
DNA (897bp) protein (299aa)
ATP synthase F1 subunit gamma (EC:3.6.3.14); K02115 F-type H+-transporting ATPase subunit gamma [EC:3.6.3.14] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
ATP synthase F1 subunit gamma (EC:3.6.3.14)
hypothetical protein id=5801232 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_1001_9
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

6552..7922
DNA (1371bp) protein (457aa)
atpD; ATP synthase F0F1 subunit beta (EC:3.6.3.14); K02112 F-type H+-transporting ATPase subunit beta [EC:3.6.3.14] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
atpD; ATP synthase F0F1 subunit beta (EC:3.6.3.14)
ATP synthase F0F1 subunit beta n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PZW0_9BACT
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_1001_10
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

7956..8378
DNA (423bp) protein (141aa)
ATP synthase F1 subunit epsilon; K02114 F-type H+-transporting ATPase subunit epsilon [EC:3.6.3.14] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hypothetical protein id=5801230 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
ATP synthase F1 subunit epsilon
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_1001_11
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

8499..9875
DNA (1377bp) protein (459aa)
pcnB; tRNA nucleotidyltransferase/poly(A) polymerase; K00970 poly(A) polymerase [EC:2.7.7.19] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
polynucleotide adenylyltransferase/metal dependent phosphohydrolase id=5091719 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
pcnB; tRNA nucleotidyltransferase/poly(A) polymerase
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_1001_12
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

10318..11577
DNA (1260bp) protein (420aa)
phosphoribosylamine--glycine ligase; K01945 phosphoribosylamine--glycine ligase [EC:6.3.4.13] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9RY22_THEOJ
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_1001_13
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

11751..11876
DNA (126bp) protein (42aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_1001_14
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

11876..12049
DNA (174bp) protein (58aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_1001_15
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(12059..12196)
DNA (138bp) protein (46aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_1001_16
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

12388..13224
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B7L0_HERA2
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_1001_17
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

13307..13972
DNA (666bp) protein (222aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_1001_18
R_SM2F11_49_9, SM2F11, Bacteria

Not on your lists

14072..15076
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Z2D9_9BACT
hypothetical protein; K09760 DNA recombination protein RmuC Tax=RIFCSPHIGHO2_01_FULL_SM2F11_49_9_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_1001_19
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

15091..15621
DNA (531bp) protein (177aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
Putative uncharacterized protein id=2438260 bin=GWA1_Kazan_50_15 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWA1_Kazan_50_15 organism_group=Kazan organism_desc=Probably Kazan: candidate for curation
hypothetical protein
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_1001_20
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

15626..16333
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=candidate division OD1 bacterium SCGC AAA011-J16 RepID=UPI0003744267
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
HAD-superfamily subfamily IB hydrolase, TIGR01490
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_1001_21
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

16543..16986
DNA (444bp) protein (148aa)
Putative uncharacterized protein n=1 Tax=Slackia heliotrinireducens (strain ATCC 29202 / DSM 20476 / NCTC 11029 / RHS 1) RepID=C7N240_SLAHD
hypothetical protein Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_1001_22
GWB1_OD1_42_6, Parcubacteria, Bacteria

Not on your lists

17011..17754
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Z1J2_9BACT
Putative uncharacterized protein Tax=GWB1_OD1_42_6
hypothetical protein
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_1001_23
R_OD1_Giovannonibacteria_46_32, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(17796..19106)
DNA (1311bp) protein (437aa)
recombinase Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_46_32_curated
recombinase id=5226883 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
recombinase
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_1001_24
R_OP11_Levybacteria_40_58, Levybacteria, Microgenomates, Bacteria

Not on your lists

19274..22270
DNA (2997bp) protein (999aa)
type III restriction-modification enzyme, R/helicase subunit; K01156 type III restriction enzyme [EC:3.1.21.5] id=5085173 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
type III restriction enzyme, res subunit Tax=RIFCSPHIGHO2_01_FULL_OP11_Levybacteria_40_58_curated
Type III restriction enzyme, res subunit
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_1001_25
R_RIF_OP11_03_49_14, RIF-OP11-3, Microgenomates, Bacteria

Not on your lists

22273..24738
DNA (2466bp) protein (822aa)
adenine specific DNA methylase Mod Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_03_49_14_curated
adenine specific DNA methylase Mod id=5085172 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
DNA methyltransferase
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_1001_26
GWA2_RIF03_38_11_curated, RIF3, Bacteria

Not on your lists

24935..25222
DNA (288bp) protein (96aa)
hypothetical protein Tax=GWA2_RIF03_38_11_curated
hypothetical protein
hypothetical protein id=5084516 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_1001_27
GWB1_OP11_40_7, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

25229..26452
DNA (1224bp) protein (408aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR70255.1}; TaxID=1618482 species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWB1_40_7.;"
plasmid stabilization protein
putative transcription regulator with HTH domain-containing protein id=5084517 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_1001_28
GWB1_OP11_40_7, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

26454..27557
DNA (1104bp) protein (368aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KKR70256.1}; TaxID=1618482 species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWB1_40_7.;"
hypothetical protein id=5084518 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_1001_29
GWA2_RIF03_38_11_curated, RIF3, Bacteria

Not on your lists

comp(27541..28125)
DNA (585bp) protein (195aa)
hypothetical protein Tax=GWA2_RIF03_38_11_curated
hypothetical protein
hypothetical protein id=5084519 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_1001_30
R_OD1_Yanofskybacteria_41_29, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

28616..29050
DNA (435bp) protein (145aa)
Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_41_29_curated
Displaying items 1-30 of 82 in total

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