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RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_10387

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_10387_1
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..456)
DNA (456bp) protein (152aa)
Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_10387_2
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(425..1489)
DNA (1065bp) protein (355aa)
Arsenical-resistance protein n=1 Tax=Thiocapsa marina 5811 RepID=F9UFJ7_9GAMM
arsenite efflux pump protein; K03325 arsenite transporter, ACR3 family Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
arsenite transporter ACR3 family
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_10387_3
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1523..1915)
DNA (393bp) protein (131aa)
Putative transcriptional regulator, ArsR family n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GSZ1_THISH
ArsR family transcriptional regulator; K03892 ArsR family transcriptional regulator Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
arsR family transcriptional regulator
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_10387_4
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

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1962..2465
DNA (504bp) protein (168aa)
Protein-tyrosine phosphatase, low molecular weight n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JRR9_HYPDA
protein-tyrosine phosphatase, low molecular weight Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
protein-tyrosine phosphatase, low molecular weight
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_10387_5
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

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2548..3690
DNA (1143bp) protein (381aa)
Aminotransferase class V n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8K632_NITWC
class V aminotransferase Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
class V aminotransferase
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_10387_6
unknown

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comp(3654..4841)
DNA (1188bp) protein (396aa)

This feature has no annotations

RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_10387_7
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4832..5254)
DNA (423bp) protein (141aa)
UPI0003CF5B73 related cluster n=1 Tax=unknown RepID=UPI0003CF5B73
ISSpo3, transposase Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
transposase ISSpo3
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_10387_8
RBG_16_Gammaproteobacteria_51_14_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5835..6533)
DNA (699bp) protein (233aa)
TatD family hydrolase; K03424 TatD DNase family protein [EC:3.1.21.-] Tax=RBG_16_Gammaproteobacteria_51_14_curated
hypothetical protein n=1 Tax=Methylophilus methylotrophus RepID=UPI0003726B93
TatD-related deoxyribonuclease
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_10387_9
R_Gammaproteobacteria_56_15, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6632..6991)
DNA (360bp) protein (120aa)
Pilus biogenesis protein PilZ n=1 Tax=Pseudomonas alcaligenes OT 69 RepID=U3HFC3_PSEAC
pilZ; putative type 4 pili assembly protein PilZ Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_56_15_curated
pilZ; putative type 4 pili assembly protein PilZ
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_10387_10
RBG_16_Gammaproteobacteria_51_14_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6997..7995)
DNA (999bp) protein (333aa)
holB; DNA polymerase III subunit delta' (EC:2.7.7.7); K02341 DNA polymerase III subunit delta' [EC:2.7.7.7] Tax=RBG_16_Gammaproteobacteria_51_14_curated
DNA polymerase III, delta prime subunit n=1 Tax=Beggiatoa sp. PS RepID=A7BV86_9GAMM
DNA polymerase III subunit delta'
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_10387_11
RBG_16_Gammaproteobacteria_51_14_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7989..8621)
DNA (633bp) protein (211aa)
tmk; thymidylate kinase (EC:2.7.4.9) Tax=RBG_16_Gammaproteobacteria_51_14_curated
Thymidylate kinase n=1 Tax=Pseudomonas stutzeri ATCC 14405 = CCUG 16156 RepID=H7EX56_PSEST
thymidylate kinase
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_10387_12
RBG_16_Gammaproteobacteria_51_14_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8608..9630)
DNA (1023bp) protein (341aa)
Aminodeoxychorismate lyase n=1 Tax=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) RepID=D3RUF2_ALLVD
aminodeoxychorismate lyase; K07082 UPF0755 protein Tax=RBG_16_Gammaproteobacteria_51_14_curated
aminodeoxychorismate lyase
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_10387_13
RBG_16_Gammaproteobacteria_51_14_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9627..10451)
DNA (825bp) protein (275aa)
aminodeoxychorismate lyase; K02619 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] Tax=RBG_16_Gammaproteobacteria_51_14_curated
Aminodeoxychorismate lyase n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BZF8_NITHN
aminodeoxychorismate lyase
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_10387_14
RBG_16_Gammaproteobacteria_51_14_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10510..11751)
DNA (1242bp) protein (414aa)
3-oxoacyl-(acyl-carrier-protein) synthase (EC:2.3.1.41); K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] Tax=RBG_16_Gammaproteobacteria_51_14_curated
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4T3I9_META2
3-oxoacyl-(acyl-carrier-protein) synthase II
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_10387_15
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11836..12072)
DNA (237bp) protein (79aa)
acyl carrier protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI000375DC45
acpP; acyl carrier protein Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
Acyl carrier protein
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_10387_16
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12226..12969)
DNA (744bp) protein (248aa)
fabG; 3-ketoacyl-ACP reductase; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
3-ketoacyl-ACP reductase n=1 Tax=Pseudomonas nitroreducens RepID=UPI0002E879B9
fabG; 3-ketoacyl-(acyl-carrier-protein) reductase
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_10387_17
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12991..13935)
DNA (945bp) protein (315aa)
malonyl CoA-acyl carrier protein transacylase; K00645 [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BZF4_NITHN
malonyl CoA-acyl carrier protein transacylase
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_10387_18
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14068..15036)
DNA (969bp) protein (323aa)
3-oxoacyl-ACP synthase III (EC:2.3.1.41); K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
3-oxoacyl-[acyl-carrier-protein] synthase III (EC:2.3.1.180)
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6BST3_9GAMM
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_10387_19
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15043..16056)
DNA (1014bp) protein (338aa)
glycerol-3-phosphate acyltransferase PlsX; K03621 glycerol-3-phosphate acyltransferase PlsX [EC:2.3.1.15] Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
Phosphate acyltransferase n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GSX8_THISH
phosphate acyltransferase
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_10387_20
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(16143..16328)
DNA (186bp) protein (62aa)
50S ribosomal protein L32 n=1 Tax=Spiribacter sp. UAH-SP71 RepID=U5T6Q9_9GAMM
rpmF; 50S ribosomal protein L32 Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
rpmF; 50S ribosomal protein L32
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_10387_21
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16333..16881)
DNA (549bp) protein (183aa)
Putative uncharacterized protein n=2 Tax=sulfur-oxidizing symbionts RepID=G2DAS1_9GAMM
hypothetical protein; K07040 uncharacterized protein Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
conserved hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_10387_22
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16950..17576
DNA (627bp) protein (209aa)
Maf-like protein Tgr7_1917 n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GSY3_THISH
maf protein Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
maf protein
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_10387_23
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17627..18580)
DNA (954bp) protein (318aa)
peptidase S49; K04773 protease IV [EC:3.4.21.-] Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
Peptidase S49 n=1 Tax=Thiorhodospira sibirica ATCC 700588 RepID=G4E6D5_9GAMM
peptidase S49
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_10387_24
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18632..19240)
DNA (609bp) protein (203aa)
pseudouridine synthase; K06179 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
Pseudouridine synthase n=1 Tax=Beggiatoa alba B18LD RepID=I3CD01_9GAMM
pseudouridine synthase
Displaying 24 items

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