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RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_137159

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_137159_1
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..374)
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Thioalkalivibrio RepID=UPI00035EF3F6
nusB; transcriptional terminator nusB; K03625 N utilization substance protein B Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
NusB antitermination factor
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_137159_2
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(374..883)
DNA (510bp) protein (170aa)
6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.78); K00794 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.78)
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Methylophaga nitratireducenticrescens (strain ATCC BAA-2433 / DSM 25689 / JAM1) RepID=I1XHF0_METNJ
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_137159_3
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(873..1979)
DNA (1107bp) protein (369aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase (EC:3.5.4.25 4.1.2.-); K14652 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] Tax=RifCSPlowO2_12_Gammaproteo
GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone-4-phosphate synthase n=1 Tax=Beggiatoa sp. PS RepID=A7C068_9GAMM
3,4-dihydroxy-2-butanone-4-phosphate synthase
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_137159_4
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2157..2744)
DNA (588bp) protein (196aa)
riboflavin synthase subunit alpha (EC:2.5.1.9); K00793 riboflavin synthase [EC:2.5.1.9] Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
riboflavin synthase alpha chain (EC:2.5.1.9)
Riboflavin synthase subunit alpha n=1 Tax=Pseudomonas sp. CF149 RepID=S6I1S8_9PSED
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_137159_5
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2812..3891)
DNA (1080bp) protein (360aa)
riboflavin biosynthesis protein RibD (EC:3.5.4.26 1.1.1.193); K11752 diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] T
Riboflavin biosynthesis protein RibD n=1 Tax=endosymbiont of Riftia pachyptila (vent Ph05) RepID=G2DCH6_9GAMM
riboflavin biosynthesis protein RibD
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_137159_6
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3918..4388)
DNA (471bp) protein (157aa)
NrdR family transcriptional regulator n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI000365B18C
ATP-cone domain-containing protein; K07738 transcriptional repressor NrdR Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
ATP-cone domain-containing protein
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_137159_7
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4604..5860)
DNA (1257bp) protein (419aa)
glyA; serine hydroxymethyltransferase; K00600 glycine hydroxymethyltransferase [EC:2.1.2.1] Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
Serine hydroxymethyltransferase n=1 Tax=Thiorhodococcus drewsii AZ1 RepID=G2E6J8_9GAMM
glyA; serine hydroxymethyltransferase
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_137159_8
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6176..7042
DNA (867bp) protein (289aa)
Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7C181_9GAMM
hypothetical protein; K06923 Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
hypothetical protein
Displaying 8 items

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