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RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_8723

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Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_8723_1
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

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3..569
DNA (567bp) protein (189aa)
gmk; guanylate kinase (EC:2.7.4.8); K00942 guanylate kinase [EC:2.7.4.8] Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
gmk; guanylate kinase (EC:2.7.4.8)
guanylate kinase n=1 Tax=Methylococcus capsulatus RepID=UPI0003024F47
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_8723_2
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

617..880
DNA (264bp) protein (88aa)
rpoZ_[H]; DNA-directed RNA polymerase omega subunit (EC:2.7.7.6) Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
rpoZ_[H]; DNA-directed RNA polymerase omega subunit (EC:2.7.7.6)
DNA-directed RNA polymerase subunit omega n=1 Tax=Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 / ALEN2) RepID=L0E249_THIND
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_8723_3
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

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1014..3131
DNA (2118bp) protein (706aa)
GTP diphosphokinase (EC:2.7.6.5); K00951 GTP pyrophosphokinase [EC:2.7.6.5] Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
GTP diphosphokinase (EC:2.7.6.5)
bifunctional (p)ppGpp synthetase II/ guanosine-3'''',5''''-bis pyrophosphate 3''''-pyrophosphohydrolase n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI000360D46C
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_8723_4
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3225..3608
DNA (384bp) protein (128aa)
Endoribonuclease L-PSP n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3YG52_THIV6
endoribonuclease L-PSP Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
endoribonuclease L-PSP
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_8723_5
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3677..5731
DNA (2055bp) protein (685aa)
ATP-dependent DNA helicase RecG; K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12] Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
ATP-dependent DNA helicase RecG n=1 Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6BA11_9GAMM
ATP-dependent DNA helicase RecG
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_8723_6
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5733..6290
DNA (558bp) protein (186aa)
chorismate--pyruvate lyase; K03181 chorismate--pyruvate lyase [EC:4.1.3.40] Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
chorismate-pyruvate lyase (EC:4.1.3.40)
Probable chorismate pyruvate-lyase n=1 Tax=endosymbiont of Riftia pachyptila (vent Ph05) RepID=G2DE16_9GAMM
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_8723_7
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6266..7321
DNA (1056bp) protein (352aa)
ubiA; 4-hydroxybenzoate octaprenyltransferase; K03179 4-hydroxybenzoate octaprenyltransferase [EC:2.5.1.-] Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
4-hydroxybenzoate octaprenyltransferase n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G3W5_9GAMM
ubiA; 4-hydroxybenzoate octaprenyltransferase
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_8723_8
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

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7321..8175
DNA (855bp) protein (285aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-137-I08 RepID=UPI000370716C
peptidase M14, carboxypeptidase A Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
peptidase M14, carboxypeptidase A
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_8723_9
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8197..9402)
DNA (1206bp) protein (402aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DIK3_9PROT
hypothetical protein Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_8723_10
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9428..10498)
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ABI8_9PROT
hypothetical protein Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_8723_11
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10677..11519)
DNA (843bp) protein (281aa)
Putative uncharacterized protein n=1 Tax=uncultured gamma proteobacterium RepID=Q2YZI0_9GAMM
sporulation domain-containing protein Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
sporulation protein
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_8723_12
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11516..12262)
DNA (747bp) protein (249aa)
Pantothenate kinase type III, CoaX-like protein (EC:2.7.1.33); K03525 type III pantothenate kinase [EC:2.7.1.33] Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
Pantothenate kinase type III, CoaX-like protein (EC:2.7.1.33)
Type III pantothenate kinase n=1 Tax=Methylophaga aminisulfidivorans MP RepID=F5SUE0_9GAMM
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_8723_13
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12265..13242)
DNA (978bp) protein (326aa)
biotin-(acetyl-CoA carboxylase) ligase n=1 Tax=Methylomicrobium buryatense RepID=UPI00036C8AFB
birA; bifunctional biotin operon repressor/biotin--[acetyl-CoA-carboxylase] synthetase; K03524 BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase [
birA; bifunctional biotin operon repressor/biotin--[acetyl-CoA-carboxylase] synthetase
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_8723_14
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13401..15173)
DNA (1773bp) protein (591aa)
Forkhead-associated protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BXP4_NITHN
von Willebrand factor A Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
von Willebrand factor A
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_8723_15
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15253..16113)
DNA (861bp) protein (287aa)
3-mercaptopyruvate sulfurtransferase (EC:2.8.1.2); K01011 thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
3-mercaptopyruvate sulfurtransferase (EC:2.8.1.2)
3-mercaptopyruvate sulfurtransferase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SEC6_RHOMR
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_8723_16
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16216..17277
DNA (1062bp) protein (354aa)
Putative aminopeptidase n=1 Tax=Beggiatoa alba B18LD RepID=I3CD35_9GAMM
aminopeptidase Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
aminopeptidase
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_8723_17
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17271..17975
DNA (705bp) protein (235aa)
hypothetical protein; K07735 putative transcriptional regulator Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
UPF0301 protein NIDE3217 id=2067986 bin=GWD2_Nitrospirae-related_57_8 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_8723_18
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18135..19019
DNA (885bp) protein (295aa)
Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_8723_19
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19143..19946
DNA (804bp) protein (268aa)
adenylylsulfate reductase, thioredoxin dependent (EC:1.8.4.9) Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
phosphoadenylylsulfate reductase (EC:1.8.4.8)
phosphoadenosine phosphosulfate reductase n=1 Tax=Chlorogloeopsis RepID=UPI0002FD5784
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_8723_20
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19968..20291
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Teredinibacter turnerae RepID=UPI00036F7644
hypothetical protein Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_8723_21
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20402..21376)
DNA (975bp) protein (325aa)
CysB family transcriptional regulator n=1 Tax=Hahella ganghwensis RepID=UPI0003719BB5
cysB; transcriptional regulator CysB Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
cysB; transcriptional regulator CysB
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_8723_22
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21508..22290
DNA (783bp) protein (261aa)
Putative uncharacterized protein n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SHJ2_GALCS
hypothetical protein; K07090 Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_8723_23
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22371..22595)
DNA (225bp) protein (75aa)
Putative uncharacterized protein n=1 Tax=Pseudomonas stutzeri ATCC 14405 = CCUG 16156 RepID=H7EY07_PSEST
hypothetical protein; K09794 hypothetical protein Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_8723_24
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22932..23489
DNA (558bp) protein (186aa)
Putative transcriptional regulator, TetR family n=1 Tax=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) RepID=C1CXM8_DEIDV
TetR family transcriptional regulator Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
TetR family transcriptional regulator
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_8723_25
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23576..24517
DNA (942bp) protein (314aa)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI000366B292
metallo-hydrolase/oxidoreductase Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
beta-lactamase domain-containing protein
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_8723_26
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24537..24875)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Oscillatoria acuminata PCC 6304 RepID=K9TQR4_9CYAN
hypothetical protein Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_8723_27
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24999..26027)
DNA (1029bp) protein (343aa)
ddlA; D-alanine-D-alanine ligase (EC:6.3.2.4); K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
ddlA; D-alanine-D-alanine ligase (EC:6.3.2.4)
D-alanine-D-alanine ligase n=1 Tax=Rhodopirellula europaea SH398 RepID=M5SH65_9PLAN
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_8723_28
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26024..27061)
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Rhodopirellula maiorica SM1 RepID=M5RRK8_9PLAN
hypothetical protein Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_8723_29
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27238..28020
DNA (783bp) protein (261aa)
hydroxyacylglutathione hydrolase; K01069 hydroxyacylglutathione hydrolase [EC:3.1.2.6] Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
Hydroxyacylglutathione hydrolase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HTG4_PARL1
hydroxyacylglutathione hydrolase
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_8723_30
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

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28274..29446
DNA (1173bp) protein (391aa)
Metal dependent phosphohydrolase n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8KAU2_NITWC
metal dependent phosphohydrolase Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
metal dependent phosphohydrolase
Displaying items 1-30 of 31 in total

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