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RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_6529

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Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_6529_1
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..1210
DNA (1209bp) protein (403aa)
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A (EC:3.5.1.4); K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] Tax=RifCSPlowO2_12_Gammaproteobacter
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A (EC:3.5.1.4)
Glutamyl-tRNA(Gln) amidotransferase subunit A n=2 Tax=Nitrosococcus oceani RepID=GATA_NITOC
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_6529_2
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1213..2664
DNA (1452bp) protein (484aa)
glutamyl-tRNA(Gln) amidotransferase subunit B; K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
gatB; glutamyl-tRNA amidotransferase (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G4Y3_9GAMM
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_6529_3
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2890..3615)
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z424_AZOL4
hypothetical protein; K09134 hypothetical protein Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_6529_4
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(3839..4240)
DNA (402bp) protein (134aa)
50S ribosomal protein L17 n=1 Tax=Beggiatoa alba B18LD RepID=I3CIJ7_9GAMM
50S ribosomal protein L17; K02879 large subunit ribosomal protein L17 Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
rplQ; large subunit ribosomal protein L17
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_6529_5
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4262..5266)
DNA (1005bp) protein (335aa)
DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=1 Tax=Thiorhodospira sibirica ATCC 700588 RepID=G4E5T5_9GAMM
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_6529_6
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(5288..5908)
DNA (621bp) protein (207aa)
30S ribosomal protein S4 n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G731_9GAMM
30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
30S ribosomal protein S4
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_6529_7
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(5924..6310)
DNA (387bp) protein (129aa)
30S ribosomal protein S11 n=1 Tax=Cellvibrio japonicus (strain Ueda107) RepID=RS11_CELJU
rpsK; 30S ribosomal protein S11; K02948 small subunit ribosomal protein S11 Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
rpsK; 30S ribosomal protein S11
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_6529_8
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(6331..6687)
DNA (357bp) protein (119aa)
30S ribosomal protein S13 n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=RS13_THISH
30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
30S ribosomal protein S13
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_6529_9
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(6876..8204)
DNA (1329bp) protein (443aa)
Protein translocase subunit SecY n=1 Tax=Beggiatoa alba B18LD RepID=I3CIK3_9GAMM
secY; preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
preprotein translocase subunit SecY
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_6529_10
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(8205..8642)
DNA (438bp) protein (146aa)
50S ribosomal protein L15 n=1 Tax=Marichromatium purpuratum 984 RepID=F9U2R5_MARPU
rplO; 50S ribosomal subunit protein L15 Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
50S ribosomal protein L15
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_6529_11
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(8644..8835)
DNA (192bp) protein (64aa)
50S ribosomal protein L30 n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YGM1_9GAMM
50S ribosomal protein L30; K02907 large subunit ribosomal protein L30 Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
50S ribosomal protein L30
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_6529_12
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(8838..9344)
DNA (507bp) protein (169aa)
30S ribosomal protein S5 n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G724_9GAMM
30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
30S ribosomal protein S5
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_6529_13
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(9357..9710)
DNA (354bp) protein (118aa)
50S ribosomal protein L18 n=1 Tax=Beggiatoa alba B18LD RepID=I3CIK7_9GAMM
50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
50S ribosomal protein L18
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_6529_14
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(9733..10266)
DNA (534bp) protein (178aa)
50S ribosomal protein L6 n=1 Tax=Alcanivorax hongdengensis A-11-3 RepID=L0WE59_9GAMM
rplF; 50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
rplF; 50S ribosomal protein L6
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_6529_15
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(10280..10675)
DNA (396bp) protein (132aa)
30S ribosomal protein S8 n=1 Tax=Shewanella benthica KT99 RepID=A9DNH9_9GAMM
rpsH; 30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
rpsH; 30S ribosomal protein S8
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_6529_16
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(10808..11113)
DNA (306bp) protein (102aa)
30S ribosomal protein S14 n=1 Tax=Beggiatoa alba B18LD RepID=I3CIL0_9GAMM
30S ribosomal protein S14; K02954 small subunit ribosomal protein S14 Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
30S ribosomal protein S14
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_6529_17
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(11129..11668)
DNA (540bp) protein (180aa)
50S ribosomal protein L5 n=1 Tax=Methylophaga aminisulfidivorans MP RepID=F5SWW4_9GAMM
50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
50S ribosomal protein L5
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_6529_18
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(11680..12000)
DNA (321bp) protein (107aa)
50S ribosomal protein L24 n=1 Tax=Thioalkalivibrio sp. ALJ24 RepID=UPI00037931F5
50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
rplX; large subunit ribosomal protein L24
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_6529_19
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(12004..12372)
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Beggiatoa alba B18LD RepID=I3CIL3_9GAMM
rplN; 50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
50S ribosomal protein L14
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_6529_20
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(12396..12665)
DNA (270bp) protein (90aa)
30S ribosomal protein S17 n=1 Tax=Beggiatoa alba B18LD RepID=I3CIL4_9GAMM
rpsQ; 30S ribosomal protein S17; K02961 small subunit ribosomal protein S17 Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
rpsQ; 30S ribosomal protein S17
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_6529_21
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(12662..12859)
DNA (198bp) protein (66aa)
50S ribosomal protein L29 n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0H019_9GAMM
50S ribosomal protein L29 Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
50S ribosomal protein L29
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_6529_22
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(12859..13236)
DNA (378bp) protein (126aa)
50S ribosomal protein L16 n=1 Tax=Thiorhodococcus drewsii AZ1 RepID=G2E0D1_9GAMM
50S ribosomal protein L16p (L10e); K02878 large subunit ribosomal protein L16 Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
50S ribosomal protein L16
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_6529_23
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(13285..13968)
DNA (684bp) protein (228aa)
30S ribosomal protein S3 n=1 Tax=Beggiatoa alba B18LD RepID=I3CIL7_9GAMM
rpsC; 30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
rpsC; 30S ribosomal protein S3
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_6529_24
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(13976..14314)
DNA (339bp) protein (113aa)
50S ribosomal protein L22 n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BWT9_9GAMM
rplV; 50S ribosomal protein L22; K02890 large subunit ribosomal protein L22 Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
50S ribosomal protein L22
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_6529_25
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(14311..14595)
DNA (285bp) protein (95aa)
30S ribosomal protein S19 n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BWT8_9GAMM
rpsS; ribosomal protein S19; K02965 small subunit ribosomal protein S19 Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
rpsS; ribosomal protein S19
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_6529_26
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(14607..15431)
DNA (825bp) protein (275aa)
50S ribosomal protein L2 n=1 Tax=Aquaspirillum serpens RepID=UPI0003B463A1
rplB; 50S ribosomal protein L2; K02886 large subunit ribosomal protein L2 Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
rplB; 50S ribosomal protein L2
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_6529_27
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(15452..15745)
DNA (294bp) protein (98aa)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI00036DF4D8
50S ribosomal protein L25; K02892 large subunit ribosomal protein L23 Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
50S ribosomal protein L25
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_6529_28
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(15742..16359)
DNA (618bp) protein (206aa)
50S ribosomal protein L4 n=1 Tax=uncultured bacterium RepID=K2DXY6_9BACT
rplD; 50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
rplD; 50S ribosomal protein L4
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_6529_29
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(16370..17014)
DNA (645bp) protein (215aa)
50S ribosomal protein L3 n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00035F2A14
50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
50S ribosomal protein L3
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_6529_30
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(17031..17345)
DNA (315bp) protein (105aa)
30S ribosomal protein S10 n=1 Tax=Arhodomonas aquaeolei RepID=UPI000373D102
30S ribosomal protein S10; K02946 small subunit ribosomal protein S10 Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
30S ribosomal protein S10
Displaying items 1-30 of 31 in total

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