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RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_67042_8

Organism: Gammaproteobacteria bacterium RIFCSPLOWO2_01_FULL_47_190

near complete RP 45 / 55 MC: 1 BSCG 44 / 51 ASCG 7 / 38
Location: comp(5982..6491)

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimM n=2 Tax=Nitrosococcus oceani RepID=RIMM_NITOC similarity UNIREF
DB: UNIREF100
  • Identity: 53.0
  • Coverage: 166.0
  • Bit_score: 192
  • Evalue 3.00e-46
16S rRNA-processing protein RimM; K02860 16S rRNA processing protein RimM Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 169.0
  • Bit_score: 347
  • Evalue 7.70e-93
16S rRNA-processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 53.0
  • Coverage: 166.0
  • Bit_score: 192
  • Evalue 8.30e-47

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Taxonomy

RLO_Gammaproteobacteria_47_11 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 510
ATGCAGGATGAAAAAAGACGCATTTTAGTAGGGCGTGTTGCCGGTCTCTATGGGGTCAAAGGGTGGTTAAAGATCGTGTCCTATACACGTCCACCGGAAAATATTTTTATATATAGTCCGTGGCTGATAAAACAGGATGATATCTGGTTGGAAACAGAAGTACAGGAAGGCAAGGTGCATGGCAAGGGACTGATAGTGGCTCTTGAAGGGATTGCTGAACGGGATGTTGCACGTGGGTTAATCGGGACGGACATCGGGATATATCGTTCGCAGTTGCAGGCACTCCCACCGGGTGAATATTACTGGGATGACCTGCGGGGTCTGCAGGTGATTAACCGGCAAGGGAGAGTGCTCGGCAAATTAAAAGAGATTCTGGAAACCGGCGCAAATGATGTGCTGGTGGTTGAAGGCGAGGGACGGCATTTGATTCCCCTGATATGGGATATGTATGTCATGGGTGTTGATCAGACCAAGGGAATTATTGAAGTGGATTGGGAGCCGGAGAAATAA
PROTEIN sequence
Length: 170
MQDEKRRILVGRVAGLYGVKGWLKIVSYTRPPENIFIYSPWLIKQDDIWLETEVQEGKVHGKGLIVALEGIAERDVARGLIGTDIGIYRSQLQALPPGEYYWDDLRGLQVINRQGRVLGKLKEILETGANDVLVVEGEGRHLIPLIWDMYVMGVDQTKGIIEVDWEPEK*