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RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_67042

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_67042_1
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

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3..470
DNA (468bp) protein (156aa)
Putative uncharacterized protein n=1 Tax=Methylophaga thiooxydans DMS010 RepID=C0N999_9GAMM
isoprenoid biosynthesis protein Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
isoprenoid biosynthesis protein
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_67042_2
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(480..1199)
DNA (720bp) protein (240aa)
dsbC; protein-disulfide isomerase; K03981 thiol:disulfide interchange protein DsbC [EC:5.3.4.1] Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
chitinase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002EC0189
dsbC; protein-disulfide isomerase
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_67042_3
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

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1358..3148
DNA (1791bp) protein (597aa)
Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AHC5_9PROT
type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_67042_4
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3177..3635)
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Hahella ganghwensis RepID=UPI00036C9F6C
hypothetical protein Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_67042_5
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4174..4698)
DNA (525bp) protein (175aa)
tyrosine recombinase XerD n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI000369E88C
tyrosine recombinase XerD; K04763 integrase/recombinase XerD Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
tyrosine recombinase XerD
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_67042_6
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(4846..5205)
DNA (360bp) protein (120aa)
50S ribosomal protein L19 n=1 Tax=Marichromatium purpuratum 984 RepID=F9U152_MARPU
50S ribosomal protein L19 Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
50S ribosomal protein L19
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_67042_7
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5232..5978)
DNA (747bp) protein (249aa)
trmD; tRNA (guanine-N(1)-)-methyltransferase; K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
tRNA (guanine-N(1)-)-methyltransferase n=8 Tax=Escherichia coli RepID=L2VRR3_ECOLX
trmD; tRNA (guanine-N(1)-)-methyltransferase
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_67042_8
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5982..6491)
DNA (510bp) protein (170aa)
Ribosome maturation factor RimM n=2 Tax=Nitrosococcus oceani RepID=RIMM_NITOC
16S rRNA-processing protein RimM; K02860 16S rRNA processing protein RimM Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
16S rRNA-processing protein RimM
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_67042_9
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(6595..6843)
DNA (249bp) protein (83aa)
30S ribosomal protein S16 n=2 Tax=sulfur-oxidizing symbionts RepID=G2DGA8_9GAMM
30S ribosomal protein S16; K02959 small subunit ribosomal protein S16 Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
30S ribosomal protein S16
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_67042_10
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6924..7556
DNA (633bp) protein (211aa)
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WCL5_FUSMR
5-formyltetrahydrofolate cyclo-ligase Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
5-formyltetrahydrofolate cyclo-ligase
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_67042_11
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7575..7814
DNA (240bp) protein (80aa)
Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_67042_12
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7867..8313)
DNA (447bp) protein (149aa)
Putative uncharacterized protein n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1XZ48_LEPCP
hypothetical protein Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
hypothetical protein
Displaying 12 items

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