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RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_2609

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_2609_1
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30..680)
DNA (651bp) protein (217aa)
Putative uncharacterized protein n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CUT1_SIDLE
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_2609_2
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(849..1229)
DNA (381bp) protein (127aa)
panD; aspartate alpha-decarboxylase (EC:4.1.1.11) Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
panD; aspartate alpha-decarboxylase (EC:4.1.1.11)
aspartate decarboxylase n=1 Tax=Perlucidibaca piscinae RepID=UPI0003B5B86F
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_2609_3
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1282..2136)
DNA (855bp) protein (285aa)
pantothenate synthetase (EC:6.3.2.1) Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
pantothenate synthetase (EC:6.3.2.1)
Pantothenate synthetase n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3Y5B6_THIV6
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_2609_4
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2133..2939)
DNA (807bp) protein (269aa)
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11) Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AIG3_9PROT
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_2609_5
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2936..3586)
DNA (651bp) protein (217aa)
DNA polymerase III, epsilon subunit n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GNB0_THISH
DNA polymerase III subunit epsilon Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
DNA polymerase III subunit epsilon
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_2609_6
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3691..4197)
DNA (507bp) protein (169aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ACZ8_9PROT
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_2609_7
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4190..5395)
DNA (1206bp) protein (402aa)
poly(A) polymerase (EC:2.7.7.19); K00970 poly(A) polymerase [EC:2.7.7.19] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
poly(A) polymerase (EC:2.7.7.19)
Poly(A) polymerase I n=1 Tax=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) RepID=D3RQ56_ALLVD
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_2609_8
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5784..6446)
DNA (663bp) protein (221aa)
Ankyrin repeat-containing protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QPB8_AZOSU
ankyrin repeat-containing protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
ankyrin repeat-containing protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_2609_9
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6619..7308)
DNA (690bp) protein (230aa)
estB; carboxylesterase (EC:3.1.1.1); K06999 phospholipase/carboxylesterase Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
estB; carboxylesterase (EC:3.1.1.1)
Probable carboxylesterase n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K9H0_AZOSB
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_2609_10
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7315..7674)
DNA (360bp) protein (120aa)
6-pyruvoyl tetrahydrobiopterin synthase; K01737 6-pyruvoyl tetrahydrobiopterin synthase [EC:4.2.3.12] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
6-pyruvoyl tetrahydropterin synthase family n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08RM3_STIAD
6-pyruvoyl tetrahydrobiopterin synthase
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_2609_11
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7977..8792
DNA (816bp) protein (272aa)
rhodanese; K01011 thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Rhodanese domain protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BX42_NITHN
rhodanese
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_2609_12
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8782..8994)
DNA (213bp) protein (71aa)
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_2609_13
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9975..12221
DNA (2247bp) protein (749aa)
Multi-sensor hybrid histidine kinase n=1 Tax=Aminomonas paucivorans DSM 12260 RepID=E3CYX0_9BACT
PAS domain-containing protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
PAS domain-containing protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_2609_14
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12344..13492)
DNA (1149bp) protein (383aa)
aminotransferase n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00037C4ADA
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_2609_15
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13489..14253)
DNA (765bp) protein (255aa)
HAD family hydrolase Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
HAD family hydrolase id=12497971 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
HAD family hydrolase
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_2609_16
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14414..14863
DNA (450bp) protein (150aa)
RNA polymerase-binding transcription factor DksA n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0GYX6_9GAMM
RNA polymerase-binding protein DksA Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RNA polymerase-binding protein DksA
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_2609_17
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15004..15798
DNA (795bp) protein (265aa)
undecaprenol kinase (EC:3.6.1.27); K06153 undecaprenyl-diphosphatase [EC:3.6.1.27] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Undecaprenyl-diphosphatase n=2 Tax=Methylovorus RepID=C6XB81_METSD
bacA; undecaprenol kinase
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_2609_18
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15808..16443
DNA (636bp) protein (212aa)
DedA protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DWT1_9PROT
hypothetical protein; K03975 membrane-associated protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_2609_19
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16540..17790
DNA (1251bp) protein (417aa)
Response regulator receiver modulated diguanylate cyclase n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GQJ4_THISH
response regulator receiver modulated diguanylate cyclase Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
response regulator receiver modulated diguanylate cyclase
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_2609_20
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17820..18287
DNA (468bp) protein (156aa)
Putative uncharacterized protein n=1 Tax=Thiorhodococcus drewsii AZ1 RepID=G2E090_9GAMM
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
conserved hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_2609_21
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18402..19355
DNA (954bp) protein (318aa)
Alpha/beta hydrolase fold protein n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8KBT4_NITWC
alpha/beta hydrolase fold protein; K07019 Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
alpha/beta hydrolase fold protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_2609_22
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19366..19830)
DNA (465bp) protein (155aa)
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_2609_23
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19885..20556)
DNA (672bp) protein (224aa)
putative endonuclease III-like protein (EC:3.2.2.-) Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
putative endonuclease III-like protein (EC:3.2.2.-)
Endonuclease III n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3YH32_THIV6
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_2609_24
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20612..21061)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Pseudogulbenkiania ferrooxidans 2002 RepID=B9Z0R5_9NEIS
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
chromate resistance protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_2609_25
unknown

Not on your lists

comp(21058..21168)
DNA (111bp) protein (37aa)

This feature has no annotations

RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_2609_26
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21342..21665)
DNA (324bp) protein (108aa)
Rhodanese-like protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AAG6_9PROT
rhodanese-like protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
rhodanese-like protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_2609_27
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21774..22307)
DNA (534bp) protein (178aa)
ron superoxide dismutase ChrC; K04564 superoxide dismutase, Fe-Mn family [EC:1.15.1.1] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
superoxide dismutase n=1 Tax=Ralstonia solanacearum RepID=UPI00030ED993
ron superoxide dismutase ChrC
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_2609_28
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22265..23620)
DNA (1356bp) protein (452aa)
chromate transporter n=1 Tax=Thiobacillus denitrificans RepID=UPI0003723442
chromate transporter; K07240 chromate transporter Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
chromate transporter
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_2609_29
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23639..24595)
DNA (957bp) protein (319aa)
Protein ChrB n=1 Tax=Methyloglobulus morosus KoM1 RepID=V5BGN0_9GAMM
chromate resistance exported protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
chromate resistance exported protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_2609_30
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24677..25600
DNA (924bp) protein (308aa)
SoxH like protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AKZ1_9PROT
soxH; SoxH like protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
soxH; SoxH like protein
Displaying items 1-30 of 43 in total

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