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RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_9665

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_9665_1
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

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1..1038
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Desulfurispirillum indicum (strain ATCC BAA-1389 / S5) RepID=E6W064_DESIS
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_9665_2
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1042..1749)
DNA (708bp) protein (236aa)
short-chain dehydrogenase/reductase SDR; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Short-chain dehydrogenase/reductase SDR n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C188_NITHN
short-chain dehydrogenase/reductase SDR
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_9665_3
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1770..2648)
DNA (879bp) protein (293aa)
Fructosamine-3-kinase n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3YF72_THIV6
fructosamine-3-kinase Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
fructosamine-3-kinase
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_9665_4
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3052..5415
DNA (2364bp) protein (788aa)
Phosphodiesterase transmembrane protein n=1 Tax=Burkholderia terrae BS001 RepID=I5CFL6_9BURK
signal transduction protein containing a membrane domain an EAL and a GGDEF domain Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
diguanylate cyclase domain protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_9665_5
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5490..5918)
DNA (429bp) protein (143aa)
DoxX family protein n=2 Tax=Methylovorus RepID=C6X819_METSD
doxx family protein; K15977 putative oxidoreductase Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
doxx family protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_9665_6
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6381..8579
DNA (2199bp) protein (733aa)
primosomal protein N'; K04066 primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:3.6.4.-] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Primosomal protein N n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C453_NITHN
primosomal protein N'
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_9665_7
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8688..9761)
DNA (1074bp) protein (358aa)
Membrane-bound metal-dependent hydrolase n=2 Tax=Nitrosococcus oceani RepID=Q3J7C8_NITOC
membrane-bound metal-dependent hydrolase; K09151 hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
membrane-bound metal-dependent hydrolase
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_9665_8
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10134..10697
DNA (564bp) protein (188aa)
Transcriptional regulator, TetR family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IKM5_KORVE
TetR family transcriptional regulator Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
TetR family transcriptional regulator
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_9665_9
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10764..10994
DNA (231bp) protein (77aa)
SirA family protein; K04085 tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
SirA-like domain-containing protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BTB7_9GAMM
SirA family protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_9665_10
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11043..11675
DNA (633bp) protein (211aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Putative uncharacterized protein id=1357069 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_9665_11
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11692..12135
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Thiorhodovibrio sp. 970 RepID=H8Z0T4_9GAMM
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_9665_12
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12160..12579)
DNA (420bp) protein (140aa)
Protoporphyrinogen IX oxidase, novel form, HemJ n=1 Tax=Nitrosospira sp. APG3 RepID=M5DTZ5_9PROT
hypothetical protein; K08973 putative membrane protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_9665_13
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12611..13123)
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Methylovulum miyakonense RepID=UPI00037B9A5D
thioredoxin Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
thioredoxin
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_9665_14
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13120..14046)
DNA (927bp) protein (309aa)
oxygen-independent coproporphyrinogen III oxidase (EC:1.3.99.22); K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
oxygen-independent coproporphyrinogen III oxidase (EC:1.3.99.22)
Oxygen-independent coproporphyrinogen III oxidase n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8KBN4_NITWC
Displaying 14 items

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