ggKbase home page

RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_18510

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_18510_1
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1..252
DNA (252bp) protein (84aa)
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=SYFA_THIDA
phenylalanyl-tRNA synthetase subunit alpha Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_18510_2
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


377..2755
DNA (2379bp) protein (793aa)
phenylalanyl-tRNA synthetase subunit beta; K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Thiocapsa marina 5811 RepID=F9UEF6_9GAMM
phenylalanyl-tRNA synthetase subunit beta
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_18510_3
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2792..3124
DNA (333bp) protein (111aa)
Integration host factor subunit alpha n=1 Tax=Thiocapsa marina 5811 RepID=F9UEF5_9GAMM
integration host factor subunit alpha; K04764 integration host factor subunit alpha Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
integration host factor subunit alpha
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_18510_4
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3117..3476
DNA (360bp) protein (120aa)
MerR family transcriptional regulator n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7IED4_PSEPS
MerR family transcriptional regulator Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
MerR family transcriptional regulator
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_18510_5
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3507..4214
DNA (708bp) protein (236aa)
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_18510_6
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4214..4960
DNA (747bp) protein (249aa)
surE; stationary phase survival protein SurE (EC:3.1.3.2); K03787 5'-nucleotidase [EC:3.1.3.5] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
surE; stationary phase survival protein SurE (EC:3.1.3.2)
stationary phase survival protein SurE n=1 Tax=Methylococcus capsulatus RepID=UPI0002DBDD85
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_18510_7
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4993..5646
DNA (654bp) protein (218aa)
pcm; protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77); K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
pcm; protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77)
Protein-L-isoaspartate O-methyltransferase n=1 Tax=gamma proteobacterium IMCC2047 RepID=F3KDV1_9GAMM
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_18510_8
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5678..6439
DNA (762bp) protein (254aa)
Lipoprotein NlpD n=1 Tax=Cellvibrio japonicus (strain Ueda107) RepID=B3PJA7_CELJU
nlpD; lipoprotein NlpD; K06194 lipoprotein NlpD Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
nlpD; lipoprotein NlpD
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_18510_9
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6442..7518
DNA (1077bp) protein (359aa)
RNA polymerase sigma factor RpoS n=1 Tax=Pseudomonas fulva (strain 12-X) RepID=F6ABV1_PSEF1
RpoD subfamily RNA polymerase sigma-70 subunit; K03087 RNA polymerase nonessential primary-like sigma factor Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RpoD subfamily RNA polymerase sigma-70 subunit
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_18510_10
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7804..8178)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6A9Z3_9PROT
hypothetical protein; K09008 hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_18510_11
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8414..9631
DNA (1218bp) protein (406aa)
class I and II aminotransferase; K14261 alanine-synthesizing transaminase [EC:2.6.1.-] Tax=RBG_16_Gamma2_65_34_curated
aspartate aminotransferase n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI000370E9C8
class I and II aminotransferase
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_18510_12
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9771..11093
DNA (1323bp) protein (441aa)
Homoserine dehydrogenase (EC:1.1.1.3); K00003 homoserine dehydrogenase [EC:1.1.1.3] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Homoserine dehydrogenase n=1 Tax=Methylomicrobium album BG8 RepID=H8GGK7_METAL
hom; Homoserine dehydrogenase
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_18510_13
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11310..12449
DNA (1140bp) protein (380aa)
threonine synthase; K01733 threonine synthase [EC:4.2.3.1] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Threonine synthase n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GRH1_THISH
threonine synthase
Displaying 13 items

View Taxonomy