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RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_3689

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_3689_1
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(107..2293)
DNA (2187bp) protein (729aa)
DNA internalization-related competence protein ComEC/Rec2 n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BW64_NITHN
DNA internalization-like competence protein ComEC/Rec2; K02238 competence protein ComEC Tax=RBG_16_Gamma2_65_34_curated
DNA internalization-related competence protein ComEC/Rec2
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_3689_2
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2361..2891
DNA (531bp) protein (177aa)
ATP-binding protein n=1 Tax=Pseudomonas fuscovaginae RepID=UPI00035F72E2
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_3689_3
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2924..3739)
DNA (816bp) protein (272aa)
lipoprotein releasing system, ATP-binding protein; K09810 lipoprotein-releasing system ATP-binding protein [EC:3.6.3.-] Tax=RBG_16_Gamma2_60_9_curated
Lipoprotein releasing system, ATP-binding protein n=2 Tax=Burkholderia RepID=A4JFZ1_BURVG
lipoprotein releasing system, ATP-binding protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_3689_4
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3736..4980)
DNA (1245bp) protein (415aa)
LolC/E family lipoprotein releasing system, transmembrane protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ABR0_9PROT
LolC/E family lipoprotein releasing system, transmembrane protein Tax=RBG_16_Gamma2_65_34_curated
LolC/E family lipoprotein releasing system, transmembrane protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_3689_5
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5155..6297)
DNA (1143bp) protein (381aa)
Poly-gamma-glutamate capsule biosynthesis protein, putative n=2 Tax=Geobacter metallireducens RepID=Q39PU0_GEOMG
capsule biosynthesis protein; K07282 poly-gamma-glutamate synthesis protein (capsule biosynthesis protein) Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
poly-gamma-glutamate capsule biosynthesis protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_3689_6
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6313..6789)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Halomonas sp. PBN3 RepID=U7PA11_9GAMM
Uncharacterized protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_3689_7
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6908..7630
DNA (723bp) protein (241aa)
Alanine racemase domain protein n=1 Tax=Desulfohalobium retbaense (strain DSM 5692) RepID=C8WZB2_DESRD
alanine racemase domain-containing protein; K06997 Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
alanine racemase domain-containing protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_3689_8
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7983..8213
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C5C4_NITHN
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_3689_9
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8446..8715
DNA (270bp) protein (90aa)
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_3689_10
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8911..9099
DNA (189bp) protein (63aa)
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_3689_11
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9323..10120)
DNA (798bp) protein (266aa)
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_3689_12
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11066..11173)
DNA (108bp) protein (36aa)
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_3689_13
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11302..11673
DNA (372bp) protein (124aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Putative uncharacterized protein id=4389418 bin=GWF2_Lentisphaerae_49_21 species=Rhodopirellula sallentina genus=Rhodopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_3689_14
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11735..12400)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WBI4_9CYAN
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_3689_15
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13371..14255)
DNA (885bp) protein (295aa)
Integral membrane protein DUF6 n=1 Tax=Methylophaga thiooxydans DMS010 RepID=C0N3S8_9GAMM
putative permease Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
permease
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_3689_16
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14517..15725
DNA (1209bp) protein (403aa)
succinyldiaminopimelate transaminase; K14267 N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Succinyldiaminopimelate transaminase n=1 Tax=Pseudomonas stutzeri NF13 RepID=M2VNM5_PSEST
succinyldiaminopimelate aminotransferase
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_3689_17
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15851..16672
DNA (822bp) protein (274aa)
dapD; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase (EC:2.3.1.117); K00674 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase [EC:2.3.1.117] Tax=RIFCSPHIGHO2_12_FULL_Gam
dapD; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase (EC:2.3.1.117)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase n=1 Tax=endosymbiont of Tevnia jerichonana (vent Tica) RepID=G2FCS5_9GAMM
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_3689_18
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16764..17891
DNA (1128bp) protein (376aa)
succinyl-diaminopimelate desuccinylase; K01439 succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
succinyl-diaminopimelate desuccinylase n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00035C200F
succinyl-diaminopimelate desuccinylase
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_3689_19
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18198..18995
DNA (798bp) protein (266aa)
protein serine/threonine phosphatase (EC:3.1.3.16); K01090 protein phosphatase [EC:3.1.3.16] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
protein serine/threonine phosphatase (EC:3.1.3.16)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-137-C09 RepID=UPI000377FCE7
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_3689_20
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19057..19767
DNA (711bp) protein (237aa)
FHA domain containing protein n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6YQG8_9RHOO
FHA domain-containing protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
FHA domain-containing protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_3689_21
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20065..21420)
DNA (1356bp) protein (452aa)
DNA repair protein radA n=1 Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6BC25_9GAMM
radA; DNA repair protein RadA; K04485 DNA repair protein RadA/Sms Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
radA; DNA repair protein RadA
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_3689_22
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21591..22667)
DNA (1077bp) protein (359aa)
alanine racemase (EC:5.1.1.1); K01775 alanine racemase [EC:5.1.1.1] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Alanine racemase n=1 Tax=Beggiatoa sp. PS RepID=A7BWJ8_9GAMM
alanine racemase
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_3689_23
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22818..25619)
DNA (2802bp) protein (934aa)
XRE family transcriptional regulator; K02314 replicative DNA helicase [EC:3.6.4.12] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Replicative DNA helicase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BQU6_9GAMM
XRE family transcriptional regulator
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_3689_24
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(26222..26365)
DNA (144bp) protein (48aa)
30S ribosomal protein S18 n=1 Tax=uncultured gamma proteobacterium RepID=H5SM84_9GAMM
30S ribosomal protein S18; K02963 small subunit ribosomal protein S18 Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
30S ribosomal protein S18
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_3689_25
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27475..28110)
DNA (636bp) protein (212aa)
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Rivularia sp. PCC 7116 RepID=K9RMW5_9CYAN
methionine-S-sulfoxide reductase Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
methionine-S-sulfoxide reductase
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_3689_26
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28260..29006)
DNA (747bp) protein (249aa)
TrmH family RNA methyltransferase; K03218 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
23S rRNA (guanosine-2''''-O-)-methyltransferase n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00036EE7AD
TrmH family RNA methyltransferase
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_3689_27
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29008..30417)
DNA (1410bp) protein (470aa)
ribonuclease R (EC:3.1.13.1); K12573 ribonuclease R [EC:3.1.-.-] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
ribonuclease R (EC:3.1.13.1)
Ribonuclease R n=1 Tax=Marinobacter sp. EVN1 RepID=U7NNM6_9ALTE
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_3689_28
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30420..31262)
DNA (843bp) protein (281aa)
ribonuclease R (EC:3.1.13.1); K12573 ribonuclease R [EC:3.1.-.-] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
ribonuclease R (EC:3.1.13.1)
exoribonuclease R n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B54341
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_3689_29
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31516..32808)
DNA (1293bp) protein (431aa)
purA_[H]; Adenylosuccinate synthetase (EC:6.3.4.4) Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
purA_[H]; Adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase n=1 Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6BBT8_9GAMM
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_3689_30
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32977..34146)
DNA (1170bp) protein (390aa)
ATP phosphoribosyltransferase regulatory subunit (EC:2.4.2.17 6.1.1.21); K02502 ATP phosphoribosyltransferase regulatory subunit Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
ATP phosphoribosyltransferase regulatory subunit n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BLP9_9GAMM
ATP phosphoribosyltransferase regulatory subunit
Displaying items 1-30 of 38 in total

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