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RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_18245

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_18245_1
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..285
DNA (285bp) protein (95aa)
Cation transport ATPase n=1 Tax=Cycloclasticus zancles 7-ME RepID=S5T4H2_9GAMM
heavy metal translocating P-type ATPase Tax=RBG_16_Gammaproteobacteria_62_13__curated
Cation transport ATPase
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_18245_2
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(556..2151)
DNA (1596bp) protein (532aa)
Glycoside hydrolase/deacetylase n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LGP8_THEPS
glycoside hydrolase/deacetylase Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
glycoside hydrolase/deacetylase
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_18245_3
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2245..3183)
DNA (939bp) protein (313aa)
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_18245_4
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3447..3653
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F1K6_9PROT
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
SAP domain-containing protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_18245_5
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3685..3900
DNA (216bp) protein (72aa)
Uncharacterized protein n=2 Tax=Cyanothece RepID=B7K2H8_CYAP8
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_18245_6
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3990..4331
DNA (342bp) protein (114aa)
Ribosomal subunit interface protein n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GIB8_NITSI
ribosomal subunit interface protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
ribosomal subunit interface protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_18245_7
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4388..5053
DNA (666bp) protein (222aa)
phosphatidylethanolamine N-methyltransferase (EC:2.1.1.17); K00551 phosphatidylethanolamine N-methyltransferase [EC:2.1.1.17] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
phosphatidylethanolamine N-methyltransferase (EC:2.1.1.17)
Phosphatidylethanolamine N-methyltransferase n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8KBX3_NITWC
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_18245_8
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5058..5903
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Halomonas anticariensis FP35 = DSM 16096 RepID=S2L4P9_9GAMM
hypothetical protein; K06889 Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_18245_9
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6047..8470)
DNA (2424bp) protein (808aa)
Long-chain-fatty-acid--CoA ligase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DW92_9PROT
AMP-dependent synthetase and ligase Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
AMP-dependent synthetase and ligase
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_18245_10
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8683..10218)
DNA (1536bp) protein (512aa)
glycogen/starch synthase, ADP-glucose type; K00703 starch synthase [EC:2.4.1.21] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
glgA; glycogen synthase (EC:2.4.1.21)
glycogen synthase n=1 Tax=Methylococcus capsulatus RepID=UPI00030B24D7
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_18245_11
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10360..11628
DNA (1269bp) protein (423aa)
glgC; glucose-1-phosphate adenylyltransferase; K00975 glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Glucose-1-phosphate adenylyltransferase n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GTQ9_THISH
glgC; glucose-1-phosphate adenylyltransferase
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_18245_12
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11618..13324
DNA (1707bp) protein (569aa)
glycoside hydrolase n=1 Tax=Methylobacter marinus RepID=UPI00035C304C
manB; Alpha-mannosidosis/glycoside hydrolase, family 57 Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
manB; Alpha-mannosidosis/glycoside hydrolase, family 57
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_18245_13
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13321..13866
DNA (546bp) protein (182aa)
4-alpha-glucanotransferase (EC:2.4.1.25); K00705 4-alpha-glucanotransferase [EC:2.4.1.25] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
malQ; 4-alpha-glucanotransferase (EC:2.4.1.25)
4-alpha-glucanotransferase n=1 Tax=Thiorhodospira sibirica ATCC 700588 RepID=G4E5Z4_9GAMM
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_18245_14
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13811..14818
DNA (1008bp) protein (336aa)
4-alpha-glucanotransferase (EC:2.4.1.25); K00705 4-alpha-glucanotransferase [EC:2.4.1.25] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
4-alpha-glucanotransferase n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI000374B82F
4-alpha-glucanotransferase
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_18245_15
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14854..17412)
DNA (2559bp) protein (853aa)
alpha-glucan phosphorylase (EC:2.4.1.1); K00688 starch phosphorylase [EC:2.4.1.1] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
alpha-glucan phosphorylase (EC:2.4.1.1)
Alpha-glucan phosphorylase n=1 Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0AA28_ALKEH
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_18245_16
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17526..18608
DNA (1083bp) protein (361aa)
queA; S-adenosylmethionine--tRNA ribosyltransferase-isomerase; K07568 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:5.-.-.-] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Marinobacter algicola DG893 RepID=A6EWH8_9ALTE
queA; S-adenosylmethionine--tRNA ribosyltransferase-isomerase
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_18245_17
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18704..20023)
DNA (1320bp) protein (440aa)
Type I secretion outer membrane protein, TolC family n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C1H7_NITHN
TolC family type I secretion outer membrane protein; K12340 outer membrane channel protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
TolC family type I secretion outer membrane protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_18245_18
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20243..22021
DNA (1779bp) protein (593aa)
Uncharacterized protein n=1 Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4J605_9GAMM
putative phytochrome sensor protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_18245_19
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22058..24181
DNA (2124bp) protein (708aa)
Peptidase, M50 family n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YYY2_9BACT
M50 family peptidase Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
M50 family peptidase
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_18245_20
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24200..24451
DNA (252bp) protein (84aa)
secA; protein translocase subunit SecA; K03070 preprotein translocase subunit SecA Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Displaying 20 items

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