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RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_9616

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_9616_1
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

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1..843
DNA (843bp) protein (281aa)
acetylornithine aminotransferase (EC:2.6.1.11); K00818 acetylornithine aminotransferase [EC:2.6.1.11] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
acetylornithine aminotransferase (EC:2.6.1.11)
acetylornithine aminotransferase n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI000366E5A3
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_9616_2
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

953..1867
DNA (915bp) protein (305aa)
ornithine carbamoyltransferase (EC:2.1.3.3) Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase n=1 Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6CEY8_9GAMM
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_9616_3
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1970..3055
DNA (1086bp) protein (362aa)
ABC transporter-like protein; K02010 iron(III) transport system ATP-binding protein [EC:3.6.3.30] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Ferric iron ABC transporter, ATP-binding protein n=1 Tax=endosymbiont of Tevnia jerichonana (vent Tica) RepID=G2FDI7_9GAMM
ABC transporter-like protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_9616_4
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3522..5756
DNA (2235bp) protein (745aa)
diguanylate phosphodiesterase n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00037077C0
signal transduction protein containing a membrane domain an EAL and a GGDEF domain Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
signal transduction protein containing a membrane domain an EAL and a GGDEF domain
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_9616_5
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5939..7615
DNA (1677bp) protein (559aa)
ABC transporter ATP-binding protein n=1 Tax=Beggiatoa sp. PS RepID=A7BWA7_9GAMM
ABC transporter ATP-binding protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
ABC transporter ATP-binding protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_9616_6
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8187..8678
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Amphimedon queenslandica RepID=I1EKK7_AMPQE
disulfide bond formation protein B; K03611 disulfide bond formation protein DsbB Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
disulfide bond formation protein DsbB
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_9616_7
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9011..10000)
DNA (990bp) protein (330aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003633B6B
thioredoxin-like protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
thioredoxin-like protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_9616_8
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10201..12012
DNA (1812bp) protein (604aa)
Lipid A export ATP-binding/permease protein MsbA n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFK6_9PROT
ABC transporter; K06147 ATP-binding cassette, subfamily B, bacterial Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
ABC transporter
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_9616_9
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12267..13343
DNA (1077bp) protein (359aa)
ATPase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6APB6_9PROT
ATPase Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
ATPase
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_9616_10
unknown

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comp(13482..13682)
DNA (201bp) protein (67aa)

This feature has no annotations

RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_9616_11
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13852..15090
DNA (1239bp) protein (413aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ABG7_9PROT
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_9616_12
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15254..16417
DNA (1164bp) protein (388aa)
Protein involved in sulfur oxidation dsrS n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AK50_9PROT
dsrS; protein involved in sulfur oxidation dsrS Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
dsrS; protein involved in sulfur oxidation dsrS
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_9616_13
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16640..16948)
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI000363E0AB
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_9616_14
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17024..17635)
DNA (612bp) protein (204aa)
lytic transglycosylase Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Lytic transglycosylase, catalytic id=4686850 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
lytic transglycosylase
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_9616_15
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17865..18227)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TK08_METAC
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Mannose-6-phosphate isomerase
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_9616_16
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18361..19062)
DNA (702bp) protein (234aa)
6-phosphogluconolactonase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AAE9_9PROT
6-phosphogluconolactonase Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
6-phosphogluconolactonase
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_9616_17
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19067..20542)
DNA (1476bp) protein (492aa)
zwf-2; glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49); K00036 glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
zwf-2; glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49)
Glucose-6-phosphate 1-dehydrogenase n=1 Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q602U0_METCA
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_9616_18
RBG_19FT_COMBO_Gammaproteobacteria_61_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20663..21583)
DNA (921bp) protein (307aa)
6-phosphogluconate dehydrogenase-like protein (EC:1.1.1.44); K00033 6-phosphogluconate dehydrogenase [EC:1.1.1.44] Tax=RBG_19FT_COMBO_Gammaproteobacteria_61_10_curated
6-phosphogluconate dehydrogenase (EC:1.1.1.44)
6-phosphogluconate dehydrogenase n=1 Tax=Thiobacillus thioparus RepID=UPI00037D1298
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_9616_19
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21641..22126)
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037282AA
Uncharacterized protein {ECO:0000313|EMBL:CDH47666.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contend
hypothetical protein
Displaying 19 items

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