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RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_4445

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_4445_1
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

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293..808
DNA (516bp) protein (172aa)
O-succinylhomoserine sulfhydrylase (EC:2.5.1.48); K10764 O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
O-succinylhomoserine sulfhydrylase (EC:2.5.1.48)
O-succinylhomoserine sulfhydrylase n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JSE6_9GAMM
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_4445_2
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

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863..1600
DNA (738bp) protein (246aa)
Fe-S oxidoreductase n=2 Tax=Pandoraea RepID=V5UKT4_9BURK
Fe-S oxidoreductase Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Fe-S oxidoreductase
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_4445_3
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

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1591..2994
DNA (1404bp) protein (468aa)
(4Fe-4S) cluster-containing protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QPR3_AZOSU
ykgF_[H]; putative L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
(4Fe-4S) cluster-containing protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_4445_4
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

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2991..3620
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QPR4_AZOSU
ykgF_[H]; putative L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_4445_5
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

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3643..5145
DNA (1503bp) protein (501aa)
methylmalonate-semialdehyde dehydrogenase (EC:1.2.1.27); K00140 malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] Tax=RIFCSPHIGHO2_12
methylmalonate-semialdehyde dehydrogenase (EC:1.2.1.27)
Methylmalonate-semialdehyde dehydrogenase (Acylating) n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IK33_ANADE
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_4445_6
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

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5314..6555
DNA (1242bp) protein (414aa)
Putative glycerate kinase n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3Y7T7_THIV6
putative glycerate kinase Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
putative glycerate kinase
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_4445_7
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

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6789..7478
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6CFI7_9GAMM
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_4445_8
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7513..8283)
DNA (771bp) protein (257aa)
UDP-2,3-diacylglucosamine hydrolase (EC:3.6.1.-); K03269 UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
UDP-2,3-diacylglucosamine hydrolase (EC:3.6.1.-)
UDP-2,3-diacylglucosamine hydrolase n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BQ93_9GAMM
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_4445_9
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8298..8801)
DNA (504bp) protein (168aa)
peptidyl-prolyl cis-trans isomerase B; K03768 peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Pandoraea sp. SD6-2 RepID=R7X164_9BURK
cyclophilin
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_4445_10
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

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9127..10542
DNA (1416bp) protein (472aa)
glutamyl-tRNA synthetase; K01885 glutamyl-tRNA synthetase [EC:6.1.1.17] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Glutamate--tRNA ligase n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BYC6_NITHN
glutamyl-tRNA synthetase
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_4445_11
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10567..12000
DNA (1434bp) protein (478aa)
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=SYC_THISH
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_4445_12
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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12136..13869
DNA (1734bp) protein (578aa)
acetolactate synthase, large subunit, biosynthetic type; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] Tax=RBG_16_Gamma2_64_10_curated
acetolactate synthase large subunit biosynthetic type (EC:2.2.1.6)
Acetolactate synthase, large subunit, biosynthetic type n=1 Tax=Beggiatoa alba B18LD RepID=U5FCF6_9GAMM
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_4445_13
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13959..14450
DNA (492bp) protein (164aa)
ilvH; acetolactate synthase 3 regulatory subunit (EC:2.2.1.6); K01653 acetolactate synthase I/III small subunit [EC:2.2.1.6] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
ilvH; acetolactate synthase 3 regulatory subunit (EC:2.2.1.6)
acetolactate synthase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003670CC2
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_4445_14
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

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14580..15596
DNA (1017bp) protein (339aa)
ketol-acid reductoisomerase (EC:1.1.1.86); K00053 ketol-acid reductoisomerase [EC:1.1.1.86] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
ketol-acid reductoisomerase (EC:1.1.1.86)
Ketol-acid reductoisomerase n=1 Tax=Thiorhodospira sibirica ATCC 700588 RepID=G4E1M9_9GAMM
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_4445_15
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15710..16372
DNA (663bp) protein (221aa)
psd; phosphatidylserine decarboxylase (EC:4.1.1.65); K01613 phosphatidylserine decarboxylase [EC:4.1.1.65] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
psd; phosphatidylserine decarboxylase (EC:4.1.1.65)
Phosphatidylserine decarboxylase proenzyme n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=PSD_NITEU
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_4445_16
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16372..17154
DNA (783bp) protein (261aa)
pssA; putative CDP-diacylglycerol--serine O-phosphatidyltransferase (EC:2.7.8.8); K00998 phosphatidylserine synthase [EC:2.7.8.8] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
pssA; putative CDP-diacylglycerol--serine O-phosphatidyltransferase (EC:2.7.8.8)
CDP-diacylglycerol--serine O-phosphatidyltransferase n=1 Tax=Pseudomonas sp. EGD-AK9 RepID=U1ZRI7_9PSED
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_4445_17
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17436..18983
DNA (1548bp) protein (516aa)
2-isopropylmalate synthase (EC:2.3.3.13); K01649 2-isopropylmalate synthase [EC:2.3.3.13] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
2-isopropylmalate synthase (EC:2.3.3.13)
2-isopropylmalate synthase n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI0003686909
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_4445_18
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18980..19102
DNA (123bp) protein (41aa)
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_4445_19
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19129..20034
DNA (906bp) protein (302aa)
hypothetical protein n=1 Tax=Frankia sp. BCU110501 RepID=UPI000374C288
SMP-30/Gluconolaconase/LRE domain-containing protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
gluconolaconase
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_4445_20
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20080..20829
DNA (750bp) protein (250aa)
phage SPO1 DNA polymerase-like protein; K02334 DNA polymerase bacteriophage-type [EC:2.7.7.7] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Phage SPO1 DNA polymerase-related protein n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GUB2_THISH
phage SPO1 DNA polymerase-like protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_4445_21
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20826..21323
DNA (498bp) protein (166aa)
Ribosomal-protein-alanine acetyltransferase n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0GXU5_9GAMM
ribosomal-protein-alanine acetyltransferase Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
ribosomal-protein-alanine acetyltransferase
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_4445_22
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21465..21974)
DNA (510bp) protein (170aa)
Putative uncharacterized protein n=2 Tax=sulfur-oxidizing symbionts RepID=G2DGT2_9GAMM
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_4445_23
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22153..22959)
DNA (807bp) protein (269aa)
Peptidase family M48 n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0GWK1_9GAMM
Peptidase family M48 Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Peptidase family M48
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_4445_24
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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23141..23581
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4L540_9GAMM
NTP pyrophosphohydrolase Tax=RBG_16_Gamma2_65_34_curated
NTP pyrophosphohydrolase
Displaying 24 items

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