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RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_18798

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_18798_1
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..753)
DNA (753bp) protein (251aa)
ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6; K03185 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GNE6_THISH
ubiquinone biosynthesis hydroxylase UbiH/UbiF/VisC/COQ6
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_18798_2
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(861..2162)
DNA (1302bp) protein (434aa)
peptidase M24 (EC:3.4.11.9); K01262 Xaa-Pro aminopeptidase [EC:3.4.11.9] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
peptidase M24 (EC:3.4.11.9)
Aminopeptidase P n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JXX6_9GAMM
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_18798_3
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2642..3046
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B1K5_9PROT
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_18798_4
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3120..4076
DNA (957bp) protein (319aa)
Putative peptidase, C39 family n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ABC9_9PROT
putative peptidase, C39 family Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
putative peptidase, C39 family
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_18798_5
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4167..4724)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I8I301_9GAMM
YecA family protein; K09895 hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_18798_6
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4874..5101
DNA (228bp) protein (76aa)
Putative uncharacterized protein n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IVW0_9GAMM
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_18798_7
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5103..5414
DNA (312bp) protein (104aa)
Putative uncharacterized protein n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G154_9GAMM
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_18798_8
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5644..6234
DNA (591bp) protein (197aa)
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G155_9GAMM
5,10-methenyltetrahydrofolate synthetase Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
5-formyltetrahydrofolate cyclo-ligase
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_18798_9
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6268..7080
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=gamma proteobacterium SCGC AB-629-K02 RepID=UPI00037A0D63
metallophosphoesterase; K09769 hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
metallophosphoesterase
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_18798_10
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7116..7571
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium BDW918 RepID=I2JFG6_9GAMM
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_18798_11
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7568..8146
DNA (579bp) protein (193aa)
ppiA; peptidyl-prolyl cis-trans isomerase A (EC:5.2.1.8) Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
ppiA; peptidyl-prolyl cis-trans isomerase A (EC:5.2.1.8)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-604-O16 RepID=UPI00035D630B
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_18798_12
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8168..9103)
DNA (936bp) protein (312aa)
Response regulator receiver modulated diguanylate cyclase n=1 Tax=Geitlerinema sp. PCC 7407 RepID=K9S8K4_9CYAN
response regulator receiver modulated diguanylate cyclase Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
response regulator receiver modulated diguanylate cyclase
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_18798_13
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9324..10838)
DNA (1515bp) protein (505aa)
threonine dehydratase (EC:4.3.1.19) Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
L-threonine ammonia-lyase (EC:4.3.1.19); K01754 threonine dehydratase [EC:4.3.1.19] id=12496539 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
threonine dehydratase (EC:4.3.1.19)
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_18798_14
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10922..11578
DNA (657bp) protein (219aa)
ribose 5-phosphate isomerase (EC:5.3.1.6); K01807 ribose 5-phosphate isomerase A [EC:5.3.1.6] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
ribose 5-phosphate isomerase (EC:5.3.1.6)
Ribose-5-phosphate isomerase A n=1 Tax=Thioalkalivibrio sp. (strain K90mix) RepID=D3SEL8_THISK
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_18798_15
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11621..11746
DNA (126bp) protein (42aa)
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_18798_16
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11770..12417)
DNA (648bp) protein (216aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein id=14626214 bin=bin7_NC10_sister species=Pseudomonas fluorescens genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_18798_17
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12520..13710)
DNA (1191bp) protein (397aa)
Peptidase M50 n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C3U1_NITHN
peptidase M50 Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
peptidase M50
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_18798_18
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13759..13977)
DNA (219bp) protein (73aa)
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_18798_19
unknown

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14344..14442
DNA (99bp) protein (33aa)

This feature has no annotations

Displaying 19 items

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