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RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_9405

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_9405_1
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42..1769)
DNA (1728bp) protein (576aa)
Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC:2.7.3.9); K08483 phosphotransferase system, enzyme I, PtsI [EC:2.7.3.9] Tax=RBG_16_Gamma2_64_10_curated
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BUX3_NITHN
phosphoenolpyruvate-protein phosphotransferase
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_9405_2
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1799..2068)
DNA (270bp) protein (90aa)
phosphocarrier protein HPr n=1 Tax=beta proteobacterium L13 RepID=UPI000363624A
ptsH; sugar transport PTS system phosphocarrier protein HPR; K11189 phosphocarrier protein Tax=RBG_16_Gamma2_65_34_curated
phosphotransferase system, phosphocarrier protein HPr
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_9405_3
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2068..2478)
DNA (411bp) protein (137aa)
ptsL; putative IIA component of sugar transport PTS system (EC:2.7.1.69); K02821 PTS system, ascorbate-specific IIA component [EC:2.7.1.69] Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
Phosphotransferase, mannose/fructose-specific component IIA n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6Z2I5_9RHOO
PTS system fructose subfamily transporter subunit IIA
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_9405_4
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2636..3490)
DNA (855bp) protein (285aa)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI00035DDD65
P-loop-containing kinase Tax=RBG_16_Gamma2_65_34_curated
putative P-loop-containing kinase
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_9405_5
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3491..4501)
DNA (1011bp) protein (337aa)
HPr kinase/phosphorylase (EC:2.7.11.-); K06023 HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-] Tax=RBG_16_Gamma2_65_34_curated
HPr kinase/phosphorylase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AEZ5_9PROT
HPr kinase
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_9405_6
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4803..6302)
DNA (1500bp) protein (500aa)
RNA polymerase sigma-54 factor n=1 Tax=Marinobacter adhaerens (strain HP15) RepID=E4PHR8_MARAH
rpoN; RNA polymerase, sigma 54 (sigma N) factor Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
RNA polymerase sigma 54 subunit RpoN
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_9405_7
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6466..7260)
DNA (795bp) protein (265aa)
ABC transporter; K06861 lipopolysaccharide export system ATP-binding protein [EC:3.6.3.-] Tax=RBG_16_Gamma2_65_34_curated
ABC-type (Unclassified) transport system, ATPase component n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2SBI2_HAHCH
ABC transporter ATPase
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_9405_8
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7268..7801)
DNA (534bp) protein (178aa)
OstA-like family protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SLC7_THIDA
OstA-like family protein; K09774 lipopolysaccharide export system protein LptA Tax=RBG_16_Gamma2_60_9_curated
OstA-like family protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_9405_9
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7807..8241)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B131_9PROT
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_9405_10
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8238..8819)
DNA (582bp) protein (194aa)
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC:3.1.3.45); K03270 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] Tax=RBG_16_Gammaproteobacteria_62_13
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC:3.1.3.45)
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BUY4_NITHN
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_9405_11
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8962..9936)
DNA (975bp) protein (325aa)
capsule expression protein KpsF/GutQ; K06041 arabinose-5-phosphate isomerase [EC:5.3.1.13] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
KpsF/GutQ family protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000366AAD3
capsule expression protein KpsF/GutQ
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_9405_12
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10006..11982
DNA (1977bp) protein (659aa)
Putative glutathione-regulated potassium-efflux system k+/h+ antiporter transmembrane protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BNF8_9GAMM
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_9405_13
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12166..12747
DNA (582bp) protein (194aa)
Oxidoreductase, putative n=1 Tax=Cellvibrio sp. BR RepID=I3I4L1_9GAMM
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_9405_14
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12937..13635
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Ilyobacter polytropus (strain DSM 2926 / CuHBu1) RepID=E3HAD3_ILYPC
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_9405_15
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13993..14181)
DNA (189bp) protein (63aa)
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_9405_16
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14171..14356)
DNA (186bp) protein (62aa)
Putative uncharacterized protein n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3J172_9GAMM
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_9405_17
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14467..14652)
DNA (186bp) protein (62aa)
ABC transporter permease n=1 Tax=Microbulbifer variabilis RepID=UPI0003623144
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_9405_18
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14864..16810
DNA (1947bp) protein (649aa)
acetyl-coenzyme A synthetase (EC:6.2.1.1) Tax=RBG_16_Gammaproteobacteria_62_13__curated
acetyl-CoA synthetase n=1 Tax=Lamprocystis purpurea RepID=UPI00035DC947
acetate--CoA ligase
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_9405_19
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17037..17867
DNA (831bp) protein (277aa)
toluene ABC transporter ATP-binding protein n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00037ED939
ABC transporter; K02065 putative ABC transport system ATP-binding protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
ABC transporter
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_9405_20
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17864..18643
DNA (780bp) protein (260aa)
Uncharacterized ABC transporter, permease component YrbE n=1 Tax=Methylophaga frappieri (strain ATCC BAA-2434 / DSM 25690 / JAM7) RepID=I1YIQ0_METFJ
ABC transporter, permease component YrbE; K02066 putative ABC transport system permease protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
ABC transporter, permease component YrbE
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_9405_21
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18646..19122
DNA (477bp) protein (159aa)
Putative signal peptide protein, toluene tolerance Ttg2C-like protein n=1 Tax=Burkholderia sp. YI23 RepID=G8M8Q3_9BURK
ttg2; putative signal peptide protein, toluene tolerance Ttg2C-like protein; K02067 putative ABC transport system substrate-binding protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
ttg2; putative signal peptide protein, toluene tolerance Ttg2C-like protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_9405_22
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19142..19789
DNA (648bp) protein (216aa)
signal peptide protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035E3864
toluene tolerance family protein; K07323 putative toluene tolerance protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
toluene tolerance protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_9405_23
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19786..20091
DNA (306bp) protein (102aa)
STAS domain protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BQL1_9GAMM
sulfate transporter/antisigma-factor antagonist STAS; K07122 Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
sulfate transporter/antisigma-factor antagonist STAS
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_9405_24
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20153..21070
DNA (918bp) protein (306aa)
ABC-type multidrug transport system, ATPase component n=1 Tax=Janthinobacterium sp. (strain Marseille) RepID=A6T386_JANMA
multidrug ABC transporter ATPase; K09687 antibiotic transport system ATP-binding protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
multidrug ABC transporter ATPase
Displaying 24 items

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