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RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_22529

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_22529_1

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1..141
DNA (141bp) protein (47aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2APN7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD51804.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_22529_2
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

465..1094
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Legionella longbeachae RepID=Q9API1_LEGLO
nucleotidyltransferase Tax=RBG_16_Gammaproteobacteria_62_13__curated
nucleotidyltransferase
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_22529_3
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1048..1491
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Burkholderia ambifaria IOP40-10 RepID=B1F8A7_9BURK
hypothetical protein
Tax=BJP_IG2102_Gammaproteobacteria_62_140
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_22529_4
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2565..3038)
DNA (474bp) protein (158aa)
SsrA-binding protein n=1 Tax=Methylococcus capsulatus RepID=UPI00030D9456
smpB; SsrA-binding protein; K03664 SsrA-binding protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
smpB; SsrA-binding protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_22529_5
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

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3312..4760
DNA (1449bp) protein (483aa)
Transporter n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GNW2_THISH
sodium:neurotransmitter symporter; K03308 neurotransmitter:Na+ symporter, NSS family Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
sodium:neurotransmitter symporter
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_22529_6
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

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4757..5197
DNA (441bp) protein (147aa)
Cyclase/dehydrase n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G3M0_9GAMM
cyclase/dehydrase Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
cyclase
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_22529_7
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

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5194..5520
DNA (327bp) protein (109aa)
hypothetical protein; K09801 hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein; K09801 hypothetical protein id=12498568 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_22529_8
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5517..5855)
DNA (339bp) protein (113aa)
Outer membrane protein assembly factor BamE n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z1I1_9GAMM
SmpA/OmlA domain-containing protein; K06186 small protein A Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
SmpA/OmlA
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_22529_9
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5965..6411
DNA (447bp) protein (149aa)
Fur family regulator iron uptake Fur n=3 Tax=Acidithiobacillus caldus RepID=F9ZSI6_ACICS
fur family regulator iron uptake Fur; K03711 Fur family transcriptional regulator, ferric uptake regulator Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
fur family regulator iron uptake Fur
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_22529_10
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6483..7250)
DNA (768bp) protein (256aa)
ABC-3 protein n=1 Tax=Methylotenera sp. (strain 301) RepID=D7DHR2_METS0
ABC-3 protein; K02075 zinc/manganese transport system permease protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
ABC-3 protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_22529_11
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7247..8149)
DNA (903bp) protein (301aa)
Periplasmic solute-binding protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6A9I4_9PROT
periplasmic solute-binding protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
periplasmic solute-binding protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_22529_12
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8156..9406)
DNA (1251bp) protein (417aa)
Uncharacterized protein n=1 Tax=Cycloclasticus sp. (strain P1) RepID=K0C8Z5_CYCSP
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
conserved hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_22529_13
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9676..9930
DNA (255bp) protein (85aa)
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_22529_14
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9879..10376)
DNA (498bp) protein (166aa)
bifunctional protein argHA (EC:4.3.2.1 2.3.1.1); K00619 amino-acid N-acetyltransferase [EC:2.3.1.1] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
bifunctional protein argHA (EC:4.3.2.1 2.3.1.1)
Bifunctional protein argHA n=1 Tax=Persephonella marina (strain DSM 14350 / EX-H1) RepID=C0QQJ6_PERMH
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_22529_15
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10363..12036)
DNA (1674bp) protein (558aa)
DNA repair protein RecN n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8K707_NITWC
DNA repair protein RecN; K03631 DNA repair protein RecN (Recombination protein N) Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
DNA repair protein RecN
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_22529_16
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12036..12914)
DNA (879bp) protein (293aa)
NAD kinase (EC:2.7.1.23) Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
NAD kinase (EC:2.7.1.23)
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6A9V1_9PROT
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_22529_17
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13208..14272
DNA (1065bp) protein (355aa)
Heat-inducible transcription repressor hrcA n=2 Tax=Methylovorus RepID=C6X6Y4_METSD
hrcA; heat-inducible transcription repressor; K03705 heat-inducible transcriptional repressor Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hrcA; heat-inducible transcription repressor
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_22529_18
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14399..15040
DNA (642bp) protein (214aa)
molecular chaperone GrpE n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI0003825105
GrpE protein; K03687 molecular chaperone GrpE Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
GrpE protein HSP-70 cofactor
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_22529_19
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15102..17048
DNA (1947bp) protein (649aa)
Chaperone protein DnaK n=1 Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6BIJ1_9GAMM
dnaK; molecular chaperone DnaK; K04043 molecular chaperone DnaK Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
dnaK; molecular chaperone DnaK
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_22529_20
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17188..18315
DNA (1128bp) protein (376aa)
molecular chaperone DnaJ n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00035C1551
chaperone protein DnaJ; K03686 molecular chaperone DnaJ Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
chaperone protein DnaJ
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_22529_21
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

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18947..19753
DNA (807bp) protein (269aa)
transcriptional activator domain-containing protein Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
Similar to ATP dependent transcriptional activator id=3405831 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
transcriptional activator domain-containing protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_22529_22
RBG_19FT_COMBO_Nitrospirae_42_15_curated, Nitrospirae, Bacteria

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19898..20110
DNA (213bp) protein (71aa)
Tax=RBG_19FT_COMBO_Nitrospirae_42_15_curated
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_22529_23
unknown

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20258..21040
DNA (783bp) protein (261aa)

This feature has no annotations

RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_22529_24
unknown

Not on your lists

21107..21406
DNA (300bp) protein (100aa)

This feature has no annotations

RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_22529_25
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21403..22221
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AKK7_9PROT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN35134.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella deni
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_22529_26
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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23428..24396
DNA (969bp) protein (323aa)
PT repeat-containing protein n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AZT3_HERA2
Uncharacterized protein {ECO:0000313|EMBL:EYF01425.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondrom
PT repeat-containing protein
Displaying 26 items

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