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RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_13995

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_13995_1
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

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1..660
DNA (660bp) protein (220aa)
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_13995_2
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

653..1906
DNA (1254bp) protein (418aa)
NADH dehydrogenase I subunit D (EC:1.6.99.3); K00333 NADH-quinone oxidoreductase subunit D [EC:1.6.5.3] Tax=RBG_16_Gamma2_65_34_curated
NADH dehydrogenase I subunit D (EC:1.6.99.3)
NADH-quinone oxidoreductase subunit D n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C2P2_NITHN
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_13995_3
RBG_16_Gammaproteobacteria_57_12_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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1903..2412
DNA (510bp) protein (170aa)
NADH-quinone oxidoreductase subunit E; K00334 NADH-quinone oxidoreductase subunit E [EC:1.6.5.3] Tax=RBG_16_Gammaproteobacteria_57_12_curated
NADH-quinone oxidoreductase subunit B n=1 Tax=endosymbiont of Riftia pachyptila (vent Ph05) RepID=G2DDD1_9GAMM
NADH-quinone oxidoreductase subunit E
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_13995_4
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2417..3703
DNA (1287bp) protein (429aa)
NADH-quinone oxidoreductase subunit F (EC:1.6.99.5); K00335 NADH-quinone oxidoreductase subunit F [EC:1.6.5.3] Tax=RBG_16_Gamma2_65_34_curated
NADH-quinone oxidoreductase subunit F n=1 Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6CGE4_9GAMM
NADH-quinone oxidoreductase subunit F
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_13995_5
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3700..7200
DNA (3501bp) protein (1167aa)
NADH-quinone oxidoreductase subunit G; K00336 NADH-quinone oxidoreductase subunit G [EC:1.6.5.3] Tax=RBG_16_Gamma2_65_34_curated
NADH dehydrogenase subunit G n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI000364C675
NADH-quinone oxidoreductase subunit G
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_13995_6
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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7218..7709
DNA (492bp) protein (164aa)
nuoI_[H]; NADH-ubiquinone oxidoreductase chain I (EC:1.6.5.3) Tax=RBG_16_Gamma2_60_9_curated
NADH dehydrogenase subunit I (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit I 2 n=2 Tax=Nitrosococcus oceani RepID=NUOI2_NITOC
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_13995_7
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7830..8435
DNA (606bp) protein (202aa)
nuoJ; NADH dehydrogenase I subunit J (EC:1.6.5.3); K00339 NADH-quinone oxidoreductase subunit J [EC:1.6.5.3] Tax=RBG_16_Gamma2_65_34_curated
nuoJ; NADH dehydrogenase I subunit J (EC:1.6.5.3)
NADH:ubiquinone oxidoreductase subunit J n=1 Tax=Thiobacillus denitrificans RepID=UPI00036036B2
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_13995_8
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8555..8860
DNA (306bp) protein (102aa)
nuoK; NADH dehydrogenase subunit K (EC:1.6.5.3); K00340 NADH-quinone oxidoreductase subunit K [EC:1.6.5.3] Tax=RBG_16_Gamma2_65_34_curated
NADH-quinone oxidoreductase subunit K n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G3Q1_9GAMM
NADH-quinone oxidoreductase subunit K
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_13995_9
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

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8992..10962
DNA (1971bp) protein (657aa)
proton-translocating NADH-quinone oxidoreductase subunit L (EC:1.6.99.5); K00341 NADH-quinone oxidoreductase subunit L [EC:1.6.5.3] Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
nuoL; nuoL; transmembrane NADH dehydrogenase I (chain L) oxidoreductase protein (EC:1.6.5.3)
Probable nuoL transmembrane NADH dehydrogenase I (Chain L) oxidoreductase protein n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82TV4_NITEU
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_13995_10
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10966..12444
DNA (1479bp) protein (493aa)
NADH:ubiquinone oxidoreductase subunit M n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6Y741_9RHOO
nuoM; NADH dehydrogenase subunit M Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
nuoM; NADH dehydrogenase subunit M
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_13995_11
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12561..13928
DNA (1368bp) protein (456aa)
NADH dehydrogenase subunit N (EC:1.6.99.5); K00343 NADH-quinone oxidoreductase subunit N [EC:1.6.5.3] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
NADH dehydrogenase subunit N (EC:1.6.99.5)
NADH:ubiquinone oxidoreductase subunit N n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00037936E0
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_13995_12
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14096..14515)
DNA (420bp) protein (140aa)
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_13995_13
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14596..16044)
DNA (1449bp) protein (483aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein id=5042329 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_13995_14
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16475..16750
DNA (276bp) protein (92aa)
Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7C6W7_9GAMM
hypothetical protein; K06995 Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_13995_15
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16790..17545
DNA (756bp) protein (252aa)
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_13995_16
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17711..18160
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Mastigocladopsis repens RepID=UPI0002F28CF2
Protein of unknown function (DUF3257) Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Protein of unknown function (DUF3257)
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_13995_17
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18561..19016
DNA (456bp) protein (152aa)
Ribosome maturation factor RimP n=1 Tax=Glaciecola punicea DSM 14233 = ACAM 611 RepID=H5T957_9ALTE
yhbC; hypothetical protein; K09748 ribosome maturation factor RimP Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
conserved hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_13995_18
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19045..20547
DNA (1503bp) protein (501aa)
peptidase M54 n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00037852E9
nusA; transcription elongation factor NusA; K02600 N utilization substance protein A Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
nusA; transcription elongation factor NusA
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_13995_19
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

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20570..23035
DNA (2466bp) protein (822aa)
Translation initiation factor IF-2 n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=IF2_THISH
infB; translation initiation factor IF-2; K02519 translation initiation factor IF-2 Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
infB; translation initiation factor IF-2
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_13995_20
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23144..23515
DNA (372bp) protein (124aa)
ribosome-binding factor A n=1 Tax=Thioalkalivibrio sp. ALJT RepID=UPI000373C728
rbfA_[H]; Ribosome-binding factor A Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
ribosome-binding factor A
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_13995_21
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23684..24559
DNA (876bp) protein (292aa)
tRNA pseudouridine synthase B; K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
tRNA pseudouridine synthase B n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G3T4_9GAMM
tRNA pseudouridine synthase B
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_13995_22
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


24688..24957
DNA (270bp) protein (90aa)
30S ribosomal protein S15 n=1 Tax=Laribacter hongkongensis (strain HLHK9) RepID=RS15_LARHH
rpsO; 30S ribosomal protein S15; K02956 small subunit ribosomal protein S15 Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
rpsO; 30S ribosomal protein S15
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_13995_23
unknown

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comp(24841..25101)
DNA (261bp) protein (87aa)

This feature has no annotations

RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_13995_24
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25135..25956)
DNA (822bp) protein (274aa)
Spidroin 1 n=1 Tax=Cronobacter sakazakii 701 RepID=K8CJF3_CROSK
Uncharacterized protein {ECO:0000313|EMBL:EWS64054.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp
hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_13995_25
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26039..27166
DNA (1128bp) protein (376aa)
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8); K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase n=1 Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6CGD5_9GAMM
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_13995_26
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27303..27581
DNA (279bp) protein (93aa)
Plasmid maintenance system killer n=1 Tax=mine drainage metagenome RepID=T1B0Q3_9ZZZZ
plasmid maintenance system killer protein; K07334 proteic killer suppression protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
plasmid maintenance system killer protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_13995_27
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

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27600..27878
DNA (279bp) protein (93aa)
Addiction module antidote protein, HigA n=1 Tax=mine drainage metagenome RepID=T1B953_9ZZZZ
XRE family plasmid maintenance system antidote protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
XRE family plasmid maintenance system antidote protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_13995_28
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27985..28539
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Pseudomonas mendocina DLHK RepID=J7SLQ9_PSEME
hypothetical protein; K07491 putative transposase Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_13995_29
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28669..29208
DNA (540bp) protein (180aa)
Putative uncharacterized protein n=2 Tax=Methylococcus capsulatus RepID=Q60CG5_METCA
hypothetical protein; K06910 Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_13995_30
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29303..30154
DNA (852bp) protein (284aa)
VacJ family lipoprotein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BUY6_NITHN
VacJ family lipoprotein; K04754 lipoprotein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
VacJ family lipoprotein
Displaying items 1-30 of 36 in total

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