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RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_18090

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_18090_1
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

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comp(2..3853)
DNA (3852bp) protein (1284aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
hypothetical protein id=5803020 bin=OD1_GWC2_34_28 species=Limnobacter sp. MED105 genus=Limnobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
yapH; YapH protein
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_18090_2
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

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comp(4351..5775)
DNA (1425bp) protein (475aa)
glutamyl-tRNA(Gln) amidotransferase subunit B; K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B; K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] id=5803332 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
glutamyl-tRNA(Gln) amidotransferase subunit B
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_18090_3
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(5797..6777)
DNA (981bp) protein (327aa)
Obg family GTPase CgtA Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
GTPase obg id=3327905 bin=GWA1_Treponema_62_8 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
Obg family GTPase CgtA
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_18090_4
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(6787..7686)
DNA (900bp) protein (300aa)
metal-dependent protein hydrolase Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
hypothetical protein id=5227189 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
metal-dependent protein hydrolase
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_18090_5
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(7689..8084)
DNA (396bp) protein (132aa)
id=3013082 Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
id=3013082 bin=GWC1_OD1_38_17 species=ACD5 genus=ACD5 taxon_order=ACD5 taxon_class=ACD5 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_18090_6
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(8104..10542)
DNA (2439bp) protein (813aa)
preprotein translocase subunit SecA; K03070 preprotein translocase subunit SecA Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
Protein translocase subunit SecA; K03070 preprotein translocase subunit SecA id=5803033 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_18090_7
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(10552..11601)
DNA (1050bp) protein (350aa)
UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158); K00075 UDP-N-acetylmuramate dehydrogenase [EC:1.1.1.158] Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZTY9_OPITP
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_18090_8
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(11910..13079)
DNA (1170bp) protein (390aa)
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_18090_9
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(13168..14238)
DNA (1071bp) protein (357aa)
hypothetical protein n=1 Tax=alpha proteobacterium SCGC AAA015-N04 RepID=UPI00037FBD95
dehydrogenase-like protein Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
dehydrogenase-like protein
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_18090_10
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(14228..14944)
DNA (717bp) protein (239aa)
neuA; N-acetylneuraminate cytidylyltransferase NeuA (EC:2.7.7.43) Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
atm:ANT_06460 putative N-acylneuraminate cytidylyltransferase (EC:2.7.7.43); K00983 N-acylneuraminate cytidylyltransferase [EC:2.7.7.43] id=1246066 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
neuA; N-acetylneuraminate cytidylyltransferase NeuA (EC:2.7.7.43)
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_18090_11
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(15024..15764)
DNA (741bp) protein (247aa)
Phosphatase n=1 Tax=Prochlorococcus marinus (strain MIT 9215) RepID=A8G647_PROM2
phosphatase Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
phosphatase
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_18090_12
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(15858..15989)
DNA (132bp) protein (44aa)
sialic acid synthase; K01654 N-acetylneuraminate synthase [EC:2.5.1.56] Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
Displaying 12 items

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