ggKbase home page

RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_20318

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_20318_1
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(96..425)
DNA (330bp) protein (110aa)
Ribosome-binding factor A Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
Ribosome-binding factor A id=5803474 bin=OD1_GWC2_34_28 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_20318_2
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(433..1959)
DNA (1527bp) protein (509aa)
translation initiation factor IF-2; K02519 translation initiation factor IF-2 Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
infB; translation initiation factor IF-2; K02519 translation initiation factor IF-2 id=5803475 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
translation initiation factor IF-2
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_20318_3
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

2018..3190
DNA (1173bp) protein (391aa)
aminotransferase, class V superfamily; K04487 cysteine desulfurase [EC:2.8.1.7] Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00037FBA96
aminotransferase, class V superfamily
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_20318_4
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

3210..3383
DNA (174bp) protein (58aa)
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_20318_5
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

3649..3873
DNA (225bp) protein (75aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
Putative uncharacterized protein id=3682331 bin=GWC2_CP_Nitrospirae-rel_42_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=ACD58 tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_20318_6
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

3878..5902
DNA (2025bp) protein (675aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BEC8_9ARCH
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_20318_7
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

5904..6536
DNA (633bp) protein (211aa)
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_20318_8
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(6614..7096)
DNA (483bp) protein (161aa)
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_20318_9
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(7056..7544)
DNA (489bp) protein (163aa)
putative phage-associated protein Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
putative phage-associated protein id=15189748 bin=GWB1_SUB10_ACD81 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
phage-associated protein
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_20318_10
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(7856..9790)
DNA (1935bp) protein (645aa)
rnjA; ribonuclease J 1 (EC:3.1.-.-)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
RNA-metabolising metallo-beta-lactamase id=4965045 bin=GWA2_CPR4_42_17 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_20318_11
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(9812..10438)
DNA (627bp) protein (209aa)
putative ABC transporter substrate binding protein Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
Extracellular solute-binding protein family 5 id=4965044 bin=GWA2_CPR4_42_17 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
hypothetical protein
Displaying 11 items

View Taxonomy