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RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_614

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_614_1
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..173)
DNA (171bp) protein (57aa)
Tyrosine recombinase XerC id=2114308 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
site-specific recombinase, XerC; K03733 integrase/recombinase XerC Tax=GWD2_Deltaproteobacteria_55_8_curated
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_614_2
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

310..1068
DNA (759bp) protein (253aa)
Hydrolase id=2114312 bin=GWD2_Deltaproteobacteria_55_8 species=Thermacetogenium phaeum genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hydrolase Tax=GWD2_Deltaproteobacteria_55_8_curated
hydrolase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_614_3
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1075..1485
DNA (411bp) protein (137aa)
id=2114318 Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
id=2114318 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_614_4
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1515..2828)
DNA (1314bp) protein (438aa)
Major facilitator superfamily MFS_1 id=2114319 bin=GWD2_Deltaproteobacteria_55_8 species=Nostoc punctiforme genus=Nostoc taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
major facilitator transporter Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
major facilitator transporter
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_614_5
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3148..3702
DNA (555bp) protein (185aa)
hypothetical protein Tax=GWD2_Deltaproteobacteria_55_8_curated
Putative uncharacterized protein id=2114323 bin=GWD2_Deltaproteobacteria_55_8 species=Salinibacter ruber genus=Salinibacter taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_614_6
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3754..4482)
DNA (729bp) protein (243aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC:5.3.1.16); K01814 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC:5.3.1.16)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase id=2114327 bin=GWD2_Deltaproteobacteria_55_8 species=Hydrocarboniphaga effusa genus=Hydrocarboniphaga taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_614_7
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4487..5110)
DNA (624bp) protein (208aa)
imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; K02501 glutamine amidotransferase [EC:2.4.2.-] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Imidazole glycerol phosphate synthase subunit HisH id=2114331 bin=GWD2_Deltaproteobacteria_55_8 species=Halobacteroides halobius genus=Halobacteroides taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
imidazole glycerol phosphate synthase, glutamine amidotransferase subunit
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_614_8
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5150..5737)
DNA (588bp) protein (196aa)
hisB; imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19); K01693 imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
hisB; imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
Imidazoleglycerol-phosphate dehydratase n=2 Tax=Geobacter metallireducens RepID=HIS7_GEOMG
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_614_9
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5721..7034)
DNA (1314bp) protein (438aa)
hisD; histidinol dehydrogenase; K00013 histidinol dehydrogenase [EC:1.1.1.23] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
Histidinol dehydrogenase id=2004311 bin=GWD2_Deltaproteobacteria_55_8 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hisD; bifunctional histidinal dehydrogenase/histidinol dehydrogenase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_614_10
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7149..8420)
DNA (1272bp) protein (424aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7); K00790 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase id=2004313 bin=GWD2_Deltaproteobacteria_55_8 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_614_11
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8529..9458)
DNA (930bp) protein (310aa)
Methylase of polypeptide chain release factors Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Release factor glutamine methyltransferase id=2004315 bin=GWD2_Deltaproteobacteria_55_8 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Methylase of polypeptide chain release factors
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_614_12
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9463..10548)
DNA (1086bp) protein (362aa)
peptide chain release factor 1; K02835 peptide chain release factor 1 Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Peptide chain release factor 1 id=1964371 bin=GWD2_Deltaproteobacteria_55_8 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
peptide chain release factor 1
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_614_13
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(10646..10849)
DNA (204bp) protein (68aa)
50S ribosomal protein L31 id=1964373 bin=GWD2_Deltaproteobacteria_55_8 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
50S ribosomal protein L31; K02909 large subunit ribosomal protein L31 Tax=GWD2_Deltaproteobacteria_55_8_curated
50S ribosomal protein L31
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_614_14
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11127..11564
DNA (438bp) protein (146aa)
Diguanylate cyclase (GGDEF) domain-containing protein id=1964375 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Diguanylate cyclase (GGDEF) domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
diguanylate cyclase domain-containing protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_614_15
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11580..11957
DNA (378bp) protein (126aa)
Response regulator receiver protein id=1964406 bin=GWD2_Deltaproteobacteria_55_8 species=Chloroflexus aggregans genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
response regulator receiver protein Tax=GWD2_Deltaproteobacteria_55_8_curated
response regulator receiver protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_614_16
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12163..12366
DNA (204bp) protein (68aa)
cyclic nucleotide-binding:Sulfate transporter/antisigma-factor antagonist STAS:xanthine/uracil/vitamin C permease:sulphate transporter Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
Sulphate transporter id=3061110 bin=GWC2_Syntrophobacterales_56_13 species=Candidatus Accumulibacter phosphatis genus=Candidatus Accumulibacter taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
sulfate transporter
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_614_17
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12490..13524
DNA (1035bp) protein (345aa)
Putative uncharacterized protein id=1964409 bin=GWD2_Deltaproteobacteria_55_8 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein Tax=GWD2_Deltaproteobacteria_55_8_curated
hypothetical protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_614_18
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13549..14547)
DNA (999bp) protein (333aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component id=1964412 bin=GWD2_Deltaproteobacteria_55_8 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein Tax=GWD2_Deltaproteobacteria_55_8_curated
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_614_19
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14668..14784
DNA (117bp) protein (39aa)
Putative uncharacterized protein id=1964414 bin=GWD2_Deltaproteobacteria_55_8 species=Planctomyces maris genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein; K06872 uncharacterized protein Tax=GWD2_Deltaproteobacteria_55_8_curated
Displaying 19 items

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