ggKbase home page

RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_15362

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_15362_1
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..100
DNA (99bp) protein (33aa)
Elongation factor Tu n=1 Tax=Brevundimonas sp. BAL3 RepID=B4W9A0_9CAUL
elongation factor Tu; K02358 elongation factor Tu Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
elongation factor Tu
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_15362_2
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


147..458
DNA (312bp) protein (104aa)
30S ribosomal protein S10 n=1 Tax=uncultured bacterium RepID=K2EFP6_9BACT
rpsJ; 30S ribosomal protein S10; K02946 small subunit ribosomal protein S10 Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
rpsJ; 30S ribosomal protein S10
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_15362_3
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


536..1174
DNA (639bp) protein (213aa)
50S ribosomal protein L3 n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=RL3_AROAE
rplC; 50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
rplC; 50S ribosomal protein L3
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_15362_4
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1186..1803
DNA (618bp) protein (206aa)
50S ribosomal protein L4 n=1 Tax=Bordetella avium (strain 197N) RepID=RL4_BORA1
rplD; 50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
rplD; 50S ribosomal protein L4
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_15362_5
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1800..2114
DNA (315bp) protein (105aa)
50S ribosomal protein L23 n=1 Tax=Aquaspirillum serpens RepID=UPI0003B6BA81
50S ribosomal protein L23; K02892 large subunit ribosomal protein L23 Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
50S ribosomal protein L23
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_15362_6
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2118..2945
DNA (828bp) protein (276aa)
50S ribosomal protein L2 n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7SZC4_ALCXX
rplB; 50S ribosomal protein L2; K02886 large subunit ribosomal protein L2 Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
50S ribosomal protein L2
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_15362_7
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3006..3332
DNA (327bp) protein (109aa)
30S ribosomal protein S19; K02965 small subunit ribosomal protein S19 Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
30S ribosomal protein S19 id=3537004 bin=GWA1_Deltaproteobacteria_52_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
30S ribosomal protein S19
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_15362_8
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3342..3671
DNA (330bp) protein (110aa)
50S ribosomal protein L22 n=1 Tax=Uliginosibacterium gangwonense RepID=UPI00036AC239
rplV; 50S ribosomal protein L22 Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
rplV; 50S ribosomal protein L22
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_15362_9
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3681..4598
DNA (918bp) protein (306aa)
30S ribosomal protein S3 n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QNX2_AZOSU
30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
30S ribosomal protein S3
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_15362_10
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4602..5015
DNA (414bp) protein (138aa)
50S ribosomal protein L16 n=1 Tax=Azoarcus sp. KH32C RepID=H0PUK2_9RHOO
rplP; 50S ribosomal protein L16 Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
rplP; 50S ribosomal protein L16
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_15362_11
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5019..5210
DNA (192bp) protein (64aa)
50S ribosomal protein L29 n=1 Tax=Azoarcus sp. (strain BH72) RepID=RL29_AZOSB
rpmC; 50S ribosomal protein L29; K02904 large subunit ribosomal protein L29 Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
rpmC; 50S ribosomal protein L29
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_15362_12
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5207..5491
DNA (285bp) protein (95aa)
30S ribosomal protein S17 n=1 Tax=Azoarcus sp. (strain BH72) RepID=RS17_AZOSB
rpsQ; 30S ribosomal protein S17; K02961 small subunit ribosomal protein S17 Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
rpsQ; 30S ribosomal protein S17
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_15362_13
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5617..5985
DNA (369bp) protein (123aa)
rplN; 50S ribosomal protein L14 Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
50S ribosomal protein L14
50S ribosomal protein L14 id=1820675 bin=GWE2_Gallionellales_58_10 species=unknown genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_15362_14
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6011..6328
DNA (318bp) protein (106aa)
50S ribosomal protein L24 n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QNW7_AZOSU
50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
50S ribosomal protein L24
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_15362_15
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6338..7009
DNA (672bp) protein (224aa)
50S ribosomal protein L5 n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WTV0_9BURK
rplE; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
rplE; 50S ribosomal protein L5
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_15362_16
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7020..7325
DNA (306bp) protein (102aa)
30S ribosomal protein S14 n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CP78_SIDLE
ribosomal protein S14; K02954 small subunit ribosomal protein S14 Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
ribosomal protein S14
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_15362_17
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7336..7731
DNA (396bp) protein (132aa)
30S ribosomal protein S8 n=1 Tax=Burkholderia kururiensis RepID=UPI0003484DC0
rpsH; 30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
ribosomal S8 family protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_15362_18
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7745..8278
DNA (534bp) protein (178aa)
50S ribosomal protein L6 n=1 Tax=Thauera sp. 27 RepID=N6Y4A7_9RHOO
rplF; 50S ribosomal protein L6 Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
rplF; 50S ribosomal protein L6
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_15362_19
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8292..8648
DNA (357bp) protein (119aa)
50S ribosomal protein L18 n=1 Tax=Kingella kingae PYKK081 RepID=H8DZY8_9NEIS
rplR; ribosomal protein L18 Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
rplR; ribosomal protein L18
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_15362_20
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8661..9185
DNA (525bp) protein (175aa)
30S ribosomal protein S5 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DME6_9PROT
rpsE; 30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
rpsE; 30S ribosomal protein S5
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_15362_21
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9195..9377
DNA (183bp) protein (61aa)
50S ribosomal protein L30 n=1 Tax=Azoarcus sp. (strain BH72) RepID=RL30_AZOSB
rpmD; 50S ribosomal protein L30; K02907 large subunit ribosomal protein L30 Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
rpmD; 50S ribosomal protein L30
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_15362_22
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9383..9847
DNA (465bp) protein (155aa)
50S ribosomal protein L15 n=1 Tax=Sutterella wadsworthensis 2_1_59BFAA RepID=K1JYA6_9BURK
rplO; 50S ribosomal protein L15; K02876 large subunit ribosomal protein L15 Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
rplO; 50S ribosomal protein L15
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_15362_23
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9854..11176
DNA (1323bp) protein (441aa)
Protein translocase subunit SecY n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RJC1_ACCPU
secY; preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
secY; preprotein translocase subunit SecY
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_15362_24
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11192..11305
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=2 Tax=Sutterella RepID=K1JIV6_9BURK
rpmJ; 50S ribosomal protein L36; K02919 large subunit ribosomal protein L36 Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
rpmJ; 50S ribosomal protein L36
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_15362_25
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


11386..11769
DNA (384bp) protein (128aa)
30S ribosomal protein S13 n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QNV5_AZOSU
30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
30S ribosomal protein S13
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_15362_26
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


11783..12208
DNA (426bp) protein (142aa)
30S ribosomal protein S11 n=1 Tax=Uliginosibacterium gangwonense RepID=UPI00036BF3BE
rpsK; 30S ribosomal protein S11 Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
SSU ribosomal protein S11p (S14e)
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_15362_27
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


12218..12847
DNA (630bp) protein (210aa)
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 id=12498467 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
rpsD; 30S ribosomal protein S4
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_15362_28
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12863..13846
DNA (984bp) protein (328aa)
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=1 Tax=Nitrosospira sp. APG3 RepID=M5DLV5_9PROT
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_15362_29
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


13859..14263
DNA (405bp) protein (135aa)
50S ribosomal protein L17 n=1 Tax=Thauera sp. 27 RepID=N6YB85_9RHOO
rplQ; 50S ribosomal protein L17; K02879 large subunit ribosomal protein L17 Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
rplQ; 50S ribosomal protein L17
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_15362_30
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14326..15069
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. H160 RepID=B5WGR9_9BURK
hypothetical protein; K09134 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
hypothetical protein
Displaying items 1-30 of 31 in total

View Taxonomy