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RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_38418

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_38418_1
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..257
DNA (255bp) protein (85aa)
ribose 5-phosphate isomerase (EC:5.3.1.6); K01807 ribose 5-phosphate isomerase A [EC:5.3.1.6] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
ribose 5-phosphate isomerase (EC:5.3.1.6)
id=12493288 bin=THIO_HI tax=THIO_HI organism_group=Betaproteobacteria
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_38418_2
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(254..526)
DNA (273bp) protein (91aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
hypothetical protein id=5081755 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
Fe-S cluster protector protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_38418_3
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(530..1849)
DNA (1320bp) protein (440aa)
N-acetylglutamate synthase (EC:2.3.1.1) Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
N-acetylglutamate synthase (EC:2.3.1.1)
Amino-acid acetyltransferase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AP13_9PROT
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_38418_4
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1927..2670)
DNA (744bp) protein (248aa)
16S ribosomal RNA methyltransferase RsmE; K09761 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
16S ribosomal RNA methyltransferase RsmE; K09761 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] id=12494028 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
16S ribosomal RNA methyltransferase RsmE
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_38418_5
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2685..3236
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P7L3_AROAE
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
hypothetical protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_38418_6
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3233..3577
DNA (345bp) protein (115aa)
Cupin domain-containing protein n=1 Tax=Acidovorax sp. CF316 RepID=J1EN43_9BURK
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
hypothetical protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_38418_7
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3598..3690)
DNA (93bp) protein (31aa)
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_38418_8
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3806..4402)
DNA (597bp) protein (199aa)
Cyclic nucleotide-binding protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C1Y4_NITHN
cyclic nucleotide-binding protein; K10914 CRP/FNR family transcriptional regulator, cyclic AMP receptor protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
cyclic nucleotide-binding protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_38418_9
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4463..5269)
DNA (807bp) protein (269aa)
iron ABC transporter ATPase; K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
Iron-dicitrate ABC transporter ATP-binding protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2JPG2_9PROT
ABC transporter-like protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_38418_10
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5266..6306)
DNA (1041bp) protein (347aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000382F143
transport system permease protein; K02015 iron complex transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
transport system permease
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_38418_11
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6273..6674)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Oscillatoriales cyanobacterium JSC-12 RepID=K8GQN3_9CYAN
Uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_38418_12
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6650..8173)
DNA (1524bp) protein (508aa)
uxaA; altronate hydrolase (EC:4.2.1.7); K01685 altronate hydrolase [EC:4.2.1.7] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
uxaA; altronate hydrolase (EC:4.2.1.7)
Altronate hydrolase n=1 Tax=Herbaspirillum sp. GW103 RepID=I3CRI8_9BURK
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_38418_13
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8203..8877)
DNA (675bp) protein (225aa)
4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262)
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Roseomonas sp. B5 RepID=UPI0002DF8861
4-hydroxythreonine-4-phosphate dehydrogenase-like Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
Displaying 13 items

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