ggKbase home page

RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_rifcsplowo2_02_scaffold_1333

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_rifcsplowo2_02_scaffold_1333_1
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists

comp(99..497)
DNA (399bp) protein (133aa)
winged helix family two component transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
Transcriptional regulatory protein id=4349167 bin=GWA2_Elusimicrobia_56_46 species=Spirochaeta thermophila genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
winged helix family two component transcriptional regulator
RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_rifcsplowo2_02_scaffold_1333_2
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists

comp(501..818)
DNA (318bp) protein (106aa)
Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_rifcsplowo2_02_scaffold_1333_3
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists

comp(811..1113)
DNA (303bp) protein (101aa)
carbon dioxide concentrating mechanism/carboxysome shell protein Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
Microcompartments protein id=4969233 bin=GWA2_Elusimicrobia_69_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Synergistetes tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
microcompartments protein
RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_rifcsplowo2_02_scaffold_1333_4
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists

comp(1175..2020)
DNA (846bp) protein (282aa)
deoxyribose-phosphate aldolase (EC:4.1.2.4) Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
deoxyribose-phosphate aldolase (EC:4.1.2.4)
Deoxyribose-phosphate aldolase id=5027150 bin=GWA2_Elusi-like_A8_64_40 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=GWA2_Elusi-like_A8_64_40 organism_group=Elusimicrobia
RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_rifcsplowo2_02_scaffold_1333_5
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists

comp(2021..2317)
DNA (297bp) protein (99aa)
carboxysome protein; K04028 ethanolamine utilization protein EutN Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
Ethanolamine utilization protein EutN-like id=4740656 bin=GWC2_Elusimicrobia_64_44 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
ethanolamine utilization protein EutN
RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_rifcsplowo2_02_scaffold_1333_6
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists

comp(2314..2616)
DNA (303bp) protein (101aa)
ethanolamine utilization protein EutN/carboxysome structural protein Ccml Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
Ethanolamine utilization protein EutN/carboxysome structural protein Ccml id=4969237 bin=GWA2_Elusimicrobia_69_24 species=Pseudoflavonifractor capillosus genus=Pseudoflavonifractor taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
ethanolamine utilization protein EutN/carboxysome structural protein Ccml
RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_rifcsplowo2_02_scaffold_1333_7
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists

comp(2598..3053)
DNA (456bp) protein (152aa)
RpiB/LacA/LacB family sugar-phosphate isomerase (EC:5.3.1.26); K01808 ribose 5-phosphate isomerase B [EC:5.3.1.6] Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
RpiB/LacA/LacB family sugar-phosphate isomerase (EC:5.3.1.26)
Sugar-phosphate isomerase, RpiB/LacA/LacB family n=1 Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8AAC5_THEID
RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_rifcsplowo2_02_scaffold_1333_8
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists

comp(3064..3612)
DNA (549bp) protein (183aa)
microcompartments protein Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
Microcompartments protein id=4874355 bin=GWA2_Elusimicrobia_51_34 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWA2_Elusimicrobia_51_34 organism_group=Elusimicrobia
microcompartments protein
RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_rifcsplowo2_02_scaffold_1333_9
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists

comp(3631..5070)
DNA (1440bp) protein (480aa)
putative aldehyde dehydrogenase; K04021 aldehyde dehydrogenase Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
Putative aldehyde dehydrogenase, ethanolamine utilization protein id=2209170 bin=GWA2_Elusimicrobia_66_18 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
aldehyde dehydrogenase
RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_rifcsplowo2_02_scaffold_1333_10
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists

comp(5089..5397)
DNA (309bp) protein (103aa)
ethanolamine utilization protein EutN/carboxysome structural protein Ccml; K04028 ethanolamine utilization protein EutN Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
Carbon dioxide concentrating mechanism protein CcmL id=4985854 bin=GWA2_Elusimicrobia_56_46 species=Anaerotruncus colihominis genus=Anaerotruncus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
ethanolamine utilization protein EutN/carboxysome structural protein Ccml
RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_rifcsplowo2_02_scaffold_1333_11
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists

comp(5422..5721)
DNA (300bp) protein (100aa)
microcompartments protein; K04027 ethanolamine utilization protein EutM Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
Microcompartments protein id=4969242 bin=GWA2_Elusimicrobia_69_24 species=Marinobacter hydrocarbonoclasticus genus=Marinobacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
carboxysome structural protein EutM
RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_rifcsplowo2_02_scaffold_1333_12
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists

comp(5844..6707)
DNA (864bp) protein (288aa)
Formyltetrahydrofolate deformylase n=1 Tax=uncultured Candidatus Nitrosocaldus sp. RepID=Q1ERC1_9CREN
purU; formyltetrahydrofolate deformylase Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
purU; formyltetrahydrofolate deformylase
RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_rifcsplowo2_02_scaffold_1333_13
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists

comp(6815..7444)
DNA (630bp) protein (210aa)
Phosphate propanoyltransferase n=1 Tax=Caldalkalibacillus thermarum TA2.A1 RepID=F5L676_9BACI
propanediol utilization protein Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
propanediol utilization protein
RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_rifcsplowo2_02_scaffold_1333_14
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists

comp(7499..8296)
DNA (798bp) protein (266aa)
triosephosphate isomerase ; K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1] Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
Triosephosphate isomerase n=1 Tax=Uncultured termite group 1 bacterium phylotype Rs-D17 RepID=TPIS_UNCTG
triosephosphate isomerase
RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_rifcsplowo2_02_scaffold_1333_15
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists

comp(8529..9131)
DNA (603bp) protein (201aa)
phosphate transport regulator related to PhoU Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
Phosphate transport regulator related to PhoU id=2487545 bin=GWA1_Deltaproteobacteria_52_35 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
phosphate transport regulator related to PhoU
RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_rifcsplowo2_02_scaffold_1333_16
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists

comp(9131..10153)
DNA (1023bp) protein (341aa)
pit; low-affinity inorganic phosphate transporter; K03306 inorganic phosphate transporter, PiT family Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
Phosphate transporter id=2074896 bin=GWD2_Chloroflexi_49_16 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
pit; low-affinity inorganic phosphate transporter
RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_rifcsplowo2_02_scaffold_1333_17
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists

comp(10195..11013)
DNA (819bp) protein (273aa)
ABC-3 protein; K02075 zinc/manganese transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
ABC-3 protein id=4978629 bin=GWA2_Elusimicrobia_69_24 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
ABC-3 protein
RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_rifcsplowo2_02_scaffold_1333_18
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists

comp(11010..11930)
DNA (921bp) protein (307aa)
Periplasmic solute binding protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02AU1_SOLUE
periplasmic solute binding protein; K02077 zinc/manganese transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
periplasmic solute binding protein
RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_rifcsplowo2_02_scaffold_1333_19
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists

comp(11942..13135)
DNA (1194bp) protein (398aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
hypothetical protein
Phosphate-selective porin id=1924257 bin=GWB2_Elusimicrobium_63_22 species=Thiocystis violascens genus=Thiocystis taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB2_Elusimicrobium_63_22 organism_group=Elusimicrobia organism_desc=Good -
RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_rifcsplowo2_02_scaffold_1333_20
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists

13607..13969
DNA (363bp) protein (121aa)
phosphopantetheinyl transferase ; K00997 holo-[acyl-carrier protein] synthase [EC:2.7.8.7] Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
Holo-[acyl-carrier-protein] synthase n=1 Tax=Uncultured termite group 1 bacterium phylotype Rs-D17 RepID=B1GZL4_UNCTG
phosphopantetheinyl transferase
RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_rifcsplowo2_02_scaffold_1333_21
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists

14011..14955
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Desulfurispora thermophila RepID=UPI00036B0416
carbohydrate kinase Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
carbohydrate kinase
RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_rifcsplowo2_02_scaffold_1333_22
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists

14948..16111
DNA (1164bp) protein (388aa)
hypothetical protein n=1 Tax=Orenia marismortui RepID=UPI00036E9BCD
amidohydrolase Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
amidohydrolase
RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_rifcsplowo2_02_scaffold_1333_23
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists

16124..16288
DNA (165bp) protein (55aa)
Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_rifcsplowo2_02_scaffold_1333_24
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists

16305..17342
DNA (1038bp) protein (346aa)
thiamine-phosphate kinase (EC:2.7.4.16); K00946 thiamine-monophosphate kinase [EC:2.7.4.16] Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
thiamine-phosphate kinase (EC:2.7.4.16)
hypothetical protein n=1 Tax=Nitrospina sp. AB-629-B18 RepID=UPI00035F2603
RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_rifcsplowo2_02_scaffold_1333_25
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists

17342..17836
DNA (495bp) protein (165aa)
Uncharacterized protein family UPF0079, ATPase n=1 Tax=Oscillatoria nigro-viridis PCC 7112 RepID=K9VBP9_9CYAN
Uncharacterized protein family UPF0079, ATPase Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
Uncharacterized protein family UPF0079, ATPase
RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_rifcsplowo2_02_scaffold_1333_26
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists

17809..18540
DNA (732bp) protein (244aa)
peptidase M22 glycoprotease; K14742 hypothetical protease [EC:3.4.-.-] Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
Peptidase M22 glycoprotease n=1 Tax=Thermoanaerobacter italicus (strain DSM 9252 / Ab9) RepID=D3T7A7_THEIA
peptidase M22 glycoprotease
RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_rifcsplowo2_02_scaffold_1333_27
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists

18666..19574
DNA (909bp) protein (303aa)
branched-chain amino acid aminotransferase, group I Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
Branched chain amino acid aminotransferase apoenzyme id=3929480 bin=GWF2_Nitrospirae_44_13 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
branched-chain amino acid aminotransferase, group I
RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_rifcsplowo2_02_scaffold_1333_28
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists

19590..20003
DNA (414bp) protein (138aa)
Thioesterase superfamily protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MH86_9BACT
thioesterase superfamily protein Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
thioesterase superfamily protein
RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_rifcsplowo2_02_scaffold_1333_29
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists

20076..20354
DNA (279bp) protein (93aa)
hypothetical protein; K09803 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
Putative uncharacterized protein id=4923578 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
hypothetical protein
RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_rifcsplowo2_02_scaffold_1333_30
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists

20341..20544
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SL58_9DELT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
hypothetical protein
Displaying items 1-30 of 39 in total

View Taxonomy