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RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_6691

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_6691_1
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

2..529
DNA (528bp) protein (176aa)
Putative uncharacterized protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJZ5_CHLTF
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_6691_2
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(554..799)
DNA (246bp) protein (82aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_6691_3
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(799..1794)
DNA (996bp) protein (332aa)
GHMP kinase; K07031 D-glycero-alpha-D-manno-heptose-7-phosphate kinase [EC:2.7.1.168] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
GHMP kinase; K07031 D-glycero-alpha-D-manno-heptose-7-phosphate kinase [EC:2.7.1.168] id=12555324 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
GHMP kinase
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_6691_4
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

1855..2982
DNA (1128bp) protein (376aa)
glycosyl hydrolase, family 3; K01207 beta-N-acetylhexosaminidase [EC:3.2.1.52] id=12555323 bin=CNBR_ACIDO species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
glycosyl hydrolase family protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
glycosyl hydrolase
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_6691_5
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

2982..3905
DNA (924bp) protein (308aa)
peptidase U61 LD-carboxypeptidase A; K01297 muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] id=12555322 bin=CNBR_ACIDO species=Terriglobus saanensis genus=Terriglobus taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
putative MccF-like protein (microcin C7 resistance) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
putative MccF-like protein (microcin C7 resistance)
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_6691_6
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

4004..5410
DNA (1407bp) protein (469aa)
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (EC:6.3.2.-); K02558 UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.-] Tax=RIFCSPLOWO2
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (EC:6.3.2.-); K02558 UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.-] id=12555321 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (EC:6.3.2.-)
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_6691_7
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

5635..6282
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Anaeromusa acidaminophila RepID=UPI00037C5FA2
allophanate hydrolase subunit 1 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
allophanate hydrolase subunit 1
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_6691_8
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

6284..7300
DNA (1017bp) protein (339aa)
putative allophanate hydrolase subunit 2 (EC:3.5.1.54) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
putative allophanate hydrolase subunit 2 (EC:3.5.1.54)
Putative Allophanate hydrolase, subunit 2 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCF1_9BACT
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_6691_9
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

7297..8232
DNA (936bp) protein (312aa)
murB; UDP-N-acetylenolpyruvoylglucosamine reductase; K00075 UDP-N-acetylmuramate dehydrogenase [EC:1.1.1.158] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158); K00075 UDP-N-acetylmuramate dehydrogenase [EC:1.1.1.158] id=12555320 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
murB; UDP-N-acetylenolpyruvoylglucosamine reductase
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_6691_10
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

8327..9139
DNA (813bp) protein (271aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q029F6_SOLUE
glyoxalase/bleomycin resistance protein/dioxygenase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
glyoxalase/bleomycin resistance protein/dioxygenase
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_6691_11
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

9194..10459
DNA (1266bp) protein (422aa)
UDP-N-acetylglucosamine1-carboxyvinyltransferase; K00790 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; K00790 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] id=12555319 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
UDP-N-acetylglucosamine1-carboxyvinyltransferase
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_6691_12
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(10485..11165)
DNA (681bp) protein (227aa)
outer membrane lipoprotein carrier protein LolA; K03634 outer membrane lipoprotein carrier protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
lolA1; hypothetical protein; K03634 outer membrane lipoprotein carrier protein id=12555310 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
outer membrane lipoprotein carrier protein LolA
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_6691_13
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(11302..11667)
DNA (366bp) protein (122aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_6691_14
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(12243..13079)
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AB-629-E09 RepID=UPI0003605C60
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_6691_15
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

13550..13705
DNA (156bp) protein (52aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_6691_trna_1
unknown

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comp(13831..13903)
DNA (73bp)
transferRNA
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_6691_16
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

13987..15069
DNA (1083bp) protein (361aa)
6-phosphofructokinase (EC:2.7.1.11); K00850 6-phosphofructokinase [EC:2.7.1.11] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
phosphofructokinase (EC:2.7.1.11); K00850 6-phosphofructokinase [EC:2.7.1.11] id=12555308 bin=CNBR_ACIDO species=Herbaspirillum sp. JC206 genus=Herbaspirillum taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
6-phosphofructokinase (EC:2.7.1.11)
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_6691_17
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(15106..15675)
DNA (570bp) protein (190aa)
ribosome recycling factor; K02838 ribosome recycling factor Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
ribosome recycling factor; K02838 ribosome recycling factor id=12555307 bin=CNBR_ACIDO species=Holophaga foetida genus=Holophaga taxon_order=Holophagales taxon_class=Holophagae phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ribosome recycling factor
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_6691_18
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(15777..16502)
DNA (726bp) protein (242aa)
uridylate kinase; K09903 uridylate kinase [EC:2.7.4.22] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
pyrH; uridylate kinase; K09903 uridylate kinase [EC:2.7.4.22] id=12555306 bin=CNBR_ACIDO species=Geobacter bemidjiensis genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
uridylate kinase
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_6691_19
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(16512..17393)
DNA (882bp) protein (294aa)
tsf; elongation factor Ts; K02357 elongation factor Ts Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Elongation factor Ts id=4657852 bin=GWC2_Deltaproteobacteria_66_88 species=Phascolarctobacterium succinatutens genus=Phascolarctobacterium taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
tsf; elongation factor Ts
Displaying 20 items

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