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RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_17591

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_17591_1
R_Betaproteobacteria_61_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1472)
DNA (1470bp) protein (490aa)
cytochrome-c oxidase (EC:1.9.3.1); K02274 cytochrome c oxidase subunit I [EC:1.9.3.1] Tax=RifCSPlowO2_12_Betaproteobacteria_61_14_curated
cytochrome-c oxidase (EC:1.9.3.1)
cytochrome oxidase subunit I n=1 Tax=Methyloversatilis sp. NVD RepID=UPI00036904FF
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_17591_2
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1497..2627)
DNA (1131bp) protein (377aa)
cytochrome c oxidase subunit II; K02275 cytochrome c oxidase subunit II [EC:1.9.3.1] Tax=RBG_16_Betaproteobacteria_64_18_curated
Cytochrome c oxidase subunit 2 n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCN0_NITMU
cytochrome C oxidase subunit II
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_17591_3
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2774..3670)
DNA (897bp) protein (299aa)
bioC; biotin synthesis protein; K02169 malonyl-CoA O-methyltransferase [EC:2.1.1.197] Tax=RBG_16_Betaproteobacteria_64_18_curated
biotin biosynthesis protein BioC; K02169 malonyl-CoA O-methyltransferase [EC:2.1.1.197] id=12494189 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
bioC; biotin synthesis protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_17591_4
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3905..4627
DNA (723bp) protein (241aa)
Putative competence protein F n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K9C7_AZOSB
comF; putative competence protein F Tax=RBG_16_Betaproteobacteria_64_18_curated
comF; putative competence protein F
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_17591_5
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4634..5098
DNA (465bp) protein (155aa)
tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B7S7_9PROT
TrmH family RNA methyltransferase Tax=RBG_16_Betaproteobacteria_64_18_curated
TrmH family RNA methyltransferase
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_17591_6
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5175..6167)
DNA (993bp) protein (331aa)
gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (EC:1.1.1.94) Tax=RBG_16_Betaproteobacteria_64_18_curated
gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ADI2_9PROT
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_17591_7
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6269..6721)
DNA (453bp) protein (151aa)
Protein-export protein SecB n=1 Tax=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) RepID=SECB_CHRVO
secB; preprotein translocase subunit SecB; K03071 preprotein translocase subunit SecB Tax=RBG_16_Betaproteobacteria_64_18_curated
secB; protein export cytoplasm chaperone protein (SecB,maintains protein to be exported in unfolded state)
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_17591_8
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6761..7018)
DNA (258bp) protein (86aa)
glutaredoxin n=1 Tax=Herbaspirillum lusitanum RepID=UPI000364A924
grxC; glutaredoxin 3; K03676 glutaredoxin 3 Tax=RBG_16_Betaproteobacteria_64_18_curated
grxC; glutaredoxin 3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_17591_9
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7024..7446)
DNA (423bp) protein (141aa)
Putative rhodanese-related sulfurtransferase putative membrane protein n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=B2AGP8_CUPTR
rhodanese-related sulfurtransferase; membrane protein Tax=RBG_16_Betaproteobacteria_64_18_curated
rhodanese-related sulfurtransferase; membrane protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_17591_10
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7600..8349
DNA (750bp) protein (250aa)
phosphoglycerate mutase 1 family (EC:5.4.2.4 5.4.2.1); K01834 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.1] Tax=RBG_16_Betaproteobacteria_64_18_curated
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=Methanoplanus petrolearius (strain DSM 11571 / OCM 486 / SEBR 4847) RepID=E1RGU7_METP4
gpmA; phosphoglyceromutase
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_17591_11
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8349..9506
DNA (1158bp) protein (386aa)
Periplasmic septal ring factor with murein hydrolase activity EnvC/YibP n=1 Tax=Nitrosospira sp. APG3 RepID=M5DIF1_9PROT
peptidase M23 Tax=RBG_16_Betaproteobacteria_64_18_curated
membrane-bound metallopeptidase
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_17591_12
R_Betaproteobacteria_61_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9637..10947
DNA (1311bp) protein (437aa)
C-terminal processing peptidase; K03797 carboxyl-terminal processing protease [EC:3.4.21.102] Tax=RifCSPlowO2_12_Betaproteobacteria_61_14_curated
Carboxyl-terminal protease n=1 Tax=Thauera sp. 28 RepID=N6ZA35_9RHOO
peptidase S41
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_17591_13
R_Betaproteobacteria_61_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10971..11738
DNA (768bp) protein (256aa)
adenylyltransferase (EC:2.7.7.-); K11996 adenylyltransferase and sulfurtransferase Tax=RifCSPlowO2_12_Betaproteobacteria_61_14_curated
adenylyltransferase (EC:2.7.7.-)
molybdopterin biosynthesis protein MoeB n=1 Tax=Azoarcus toluclasticus RepID=UPI00037CE28E
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_17591_14
R_Betaproteobacteria_61_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11899..12468)
DNA (570bp) protein (190aa)
Transcriptional regulator, TetR family n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CNR3_SIDLE
TetR family transcriptional regulator; K05501 TetR/AcrR family transcriptional regulator Tax=RifCSPlowO2_12_Betaproteobacteria_61_14_curated
TetR family transcriptional regulator
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_17591_15
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12562..13215)
DNA (654bp) protein (218aa)
Pyrimidine 5'-nucleotidase n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CNR2_SIDLE
pyrimidine 5'-nucleotidase; K07025 putative hydrolase of the HAD superfamily Tax=RBG_16_Betaproteobacteria_64_18_curated
pyrimidine 5'-nucleotidase
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_17591_16
R_Betaproteobacteria_61_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13285..14166)
DNA (882bp) protein (294aa)
acetylglutamate kinase; K00930 acetylglutamate kinase [EC:2.7.2.8] Tax=RifCSPlowO2_12_Betaproteobacteria_61_14_curated
acetylglutamate kinase n=1 Tax=Azoarcus toluclasticus RepID=UPI000381A51D
acetylglutamate kinase
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_17591_17
R_Betaproteobacteria_61_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14360..14839)
DNA (480bp) protein (160aa)
60 kDa chaperonin n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RPX9_ACCPU
groEL; chaperonin GroEL; K04077 chaperonin GroEL Tax=RifCSPlowO2_12_Betaproteobacteria_61_14_curated
groEL; chaperonin GroEL
Displaying 17 items

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