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RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2017

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2017_1
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..742)
DNA (741bp) protein (247aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI000370C58C
tRNA/rRNA methyltransferase SpoU; K03437 RNA methyltransferase, TrmH family Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
tRNA/rRNA methyltransferase SpoU
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2017_2
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(745..1323)
DNA (579bp) protein (193aa)
rnhB; RNase HII (EC:3.1.26.4) Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
rnhB; RNase HII (EC:3.1.26.4)
Ribonuclease HII n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B494_9PROT
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2017_3
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1308..2432)
DNA (1125bp) protein (375aa)
lipid-A-disaccharide synthase; K00748 lipid-A-disaccharide synthase [EC:2.4.1.182] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
Lipid-A-disaccharide synthase n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QPD0_AZOSU
lipid-A-disaccharide synthase
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2017_4
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2461..3249)
DNA (789bp) protein (263aa)
acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase; K00677 UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
Acyl-(Acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QPD1_AZOSU
acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2017_5
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3228..3662)
DNA (435bp) protein (145aa)
beta-hydroxyacyl-(acyl carrier protein) dehydratase FabZ; K02372 3R-hydroxymyristoyl ACP dehydrase [EC:4.2.1.-] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AA90_9PROT
beta-hydroxyacyl-(acyl carrier protein) dehydratase FabZ
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2017_6
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3667..4689)
DNA (1023bp) protein (341aa)
UDP-3-O-acylglucosamine N-acyltransferase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AH56_9PROT
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2017_7
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4715..5227)
DNA (513bp) protein (171aa)
Putative outer membrane protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5NZG6_AROAE
outer membrane protein; K06142 outer membrane protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
outer membrane protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2017_8
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5290..7569)
DNA (2280bp) protein (760aa)
Outer membrane protein assembly factor BamA n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ACC0_9PROT
surface antigen (D15) Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
surface antigen (D15)
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2017_9
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7579..8943)
DNA (1365bp) protein (455aa)
membrane-associated zinc metalloprotease; K11749 regulator of sigma E protease [EC:3.4.24.-] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
Membrane-associated zinc metalloprotease n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CSE1_SIDLE
membrane-associated zinc metalloprotease
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2017_10
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8940..10139)
DNA (1200bp) protein (400aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Azoarcus sp. KH32C RepID=H0Q1U6_9RHOO
dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2017_11
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10136..10960)
DNA (825bp) protein (275aa)
phosphatidate cytidylyltransferase; K00981 phosphatidate cytidylyltransferase [EC:2.7.7.41] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
cdsA; phosphatidate cytidylyltransferase (EC:2.7.7.41)
Phosphatidate cytidylyltransferase n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5NZH0_AROAE
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2017_12
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10974..11723)
DNA (750bp) protein (250aa)
uppS; undecaprenyl pyrophosphate synthetase (EC:2.5.1.31); K00806 undecaprenyl diphosphate synthase [EC:2.5.1.31] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
uppS; undecaprenyl pyrophosphate synthetase (EC:2.5.1.31)
Isoprenyl transferase n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K6R7_AZOSB
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2017_13
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11809..12369)
DNA (561bp) protein (187aa)
ribosome recycling factor; K02838 ribosome recycling factor Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
Ribosome-recycling factor id=2068534 bin=GWE2_Gallionellales_58_10 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
ribosome recycling factor
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2017_14
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12406..13122)
DNA (717bp) protein (239aa)
pyrH; uridylate kinase (EC:2.7.4.-); K09903 uridylate kinase [EC:2.7.4.22] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
pyrH; uridylate kinase (EC:2.7.4.-)
Uridylate kinase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ALA0_9PROT
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2017_15
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13221..14120)
DNA (900bp) protein (300aa)
Elongation factor Ts n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7RVY1_9BURK
tsf; elongation factor Ts; K02357 elongation factor Ts Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
tsf; elongation factor Ts
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2017_16
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(14200..14946)
DNA (747bp) protein (249aa)
30S ribosomal protein S2 n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GDI5_NITSI
rpsB; 30S ribosomal protein S2; K02967 small subunit ribosomal protein S2 Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
30S ribosomal protein S2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2017_17
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15247..16041
DNA (795bp) protein (265aa)
methionine aminopeptidase (EC:3.4.11.18); K01265 methionyl aminopeptidase [EC:3.4.11.18] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y5Q2_NITMU
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2017_18
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16059..18638
DNA (2580bp) protein (860aa)
PII uridylyl-transferase n=1 Tax=Methyloversatilis universalis RepID=UPI0003723CC0
glnD; PII uridylyl-transferase Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
glnD; PII uridylyl-transferase
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2017_19
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(18785..19789)
DNA (1005bp) protein (335aa)
MFS transporter n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2J7S8_9BURK
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2017_20
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19813..21963)
DNA (2151bp) protein (717aa)
Cell division cycle protein 48 homolog AF_1297 n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=Y1297_ARCFU
cdc48-1; cell division protein CDC48; K13525 transitional endoplasmic reticulum ATPase Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
cdc48-1; cell division protein CDC48
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2017_21
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22080..23165)
DNA (1086bp) protein (362aa)
cupin; K00450 gentisate 1,2-dioxygenase [EC:1.13.11.4] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
Cupin domain protein id=1831490 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Geobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Cupin 2 barrel domain-containing protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2017_22
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23290..23820)
DNA (531bp) protein (177aa)
def; peptide deformylase (EC:3.5.1.88); K01462 peptide deformylase [EC:3.5.1.88] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
def; peptide deformylase (EC:3.5.1.88)
Peptide deformylase n=1 Tax=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) RepID=Q1H1A3_METFK
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2017_23
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23817..24359)
DNA (543bp) protein (181aa)
purine nucleoside phosphorylase; K00772 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
5'-methylthioadenosine phosphorylase (EC:2.4.2.1)
Probable 6-oxopurine nucleoside phosphorylase n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K710_AZOSB
Displaying 23 items

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