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RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_4939

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_4939_1
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(369..875)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q220F7_RHOFD
hypothetical protein; K09983 hypothetical protein Tax=RBG_16_Betaproteobacteria_64_18_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_4939_2
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1142..2758
DNA (1617bp) protein (539aa)
UPI0003CECB75 related cluster n=1 Tax=unknown RepID=UPI0003CECB75
choline dehydrogenase-like flavoprotein Tax=RBG_16_Betaproteobacteria_64_18_curated
choline dehydrogenase-like flavoprotein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_4939_3
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2968..3252
DNA (285bp) protein (95aa)
oxidoreductase n=1 Tax=Arthrobacter sp. PAO19 RepID=UPI0003B52DC4
oxidoreductase Tax=RBG_16_Betaproteobacteria_64_18_curated
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_4939_4
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3539..4153
DNA (615bp) protein (205aa)
glutathione S-transferase domain-containing protein; K00799 glutathione S-transferase [EC:2.5.1.18] Tax=RBG_16_Betaproteobacteria_64_18_curated
glutathionine S-transferase n=1 Tax=Methylobacterium sp. 88A RepID=UPI00038114CE
glutathione S-transferase domain-containing protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_4939_5
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4456..5445
DNA (990bp) protein (330aa)
Putative oxidoreductase n=1 Tax=Pseudomonas alcaligenes NBRC 14159 RepID=U3ATV3_PSEAC
alcohol dehydrogenase Tax=RBG_16_Betaproteobacteria_64_18_curated
alcohol dehydrogenase
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_4939_trna_4
unknown

Not on your lists

comp(5633..5705)
DNA (73bp)
transferRNA
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_4939_6
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5931..7406)
DNA (1476bp) protein (492aa)
pyruvate carboxylase (EC:6.4.1.1)
pyruvate carboxylase Tax=RBG_16_Betaproteobacteria_64_18_curated
Oxaloacetate decarboxylase id=1789185 bin=GWD2_Deltaproteobacteria_55_8 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_4939_7
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7437..7919)
DNA (483bp) protein (161aa)
biotin carboxyl carrier protein Tax=RBG_16_Betaproteobacteria_64_18_curated
biotin carboxyl carrier protein
Acetyl-CoA carboxylase id=2001115 bin=GWD2_Deltaproteobacteria_55_8 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_4939_8
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7991..8620)
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00035E35B1
isochorismatase hydrolase Tax=RBG_16_Betaproteobacteria_64_18_curated
isochorismatase hydrolase
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_4939_9
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8661..9404)
DNA (744bp) protein (248aa)
Putative branched-chain amino acid ABC transporter ATP-binding protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CA80_MYXFH
ABC transporter-like protein; K01996 branched-chain amino acid transport system ATP-binding protein Tax=RBG_16_Betaproteobacteria_64_18_curated
putative branched-chain amino acid ABC transporter ATP-binding protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_4939_10
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9397..10158)
DNA (762bp) protein (254aa)
ABC transporter related n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NLJ1_ROSCS
ABC transporter-like protein; K01995 branched-chain amino acid transport system ATP-binding protein Tax=RBG_16_Betaproteobacteria_64_18_curated
ABC transporter-like protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_4939_11
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10155..11108)
DNA (954bp) protein (318aa)
branched-chain amino acid ABC transporter permease n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002F4BF43
high-affinity branched-chain amino acid transporter membrane protein Tax=RBG_16_Betaproteobacteria_64_18_curated
high-affinity branched-chain amino acid transporter membrane protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_4939_12
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11108..11998)
DNA (891bp) protein (297aa)
High-affinity branched-chain amino acid transport system permease protein livh n=1 Tax=Acidovorax sp. KKS102 RepID=K0I7G5_9BURK
High-affinity branched-chain amino acid transporter permease LivH Tax=RBG_16_Betaproteobacteria_64_18_curated
High-affinity branched-chain amino acid transporter permease LivH
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_4939_13
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12313..13521)
DNA (1209bp) protein (403aa)
branched-chain amino acid ABC transporter substrate-binding protein Tax=RBG_16_Betaproteobacteria_64_18_curated
ABC-type branched-chain amino acid transport system, periplasmic component id=3209650 bin=GWC2_Methylomirabilis_70_24 species=Idiomarina sp. A28L genus=Idiomarina taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
branched-chain amino acid ABC transporter substrate-binding protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_4939_14
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13853..14824)
DNA (972bp) protein (324aa)
MFS transporter n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2I4A4_9BURK
UPF0065 protein in tcbD-tcbE intergenic region-like Tax=RBG_16_Betaproteobacteria_64_18_curated
ABC transporter substrate-binding protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_4939_trna_3
unknown

Not on your lists

comp(15694..15766)
DNA (73bp)
transferRNA
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_4939_trna_2
unknown

Not on your lists

comp(15805..15877)
DNA (73bp)
transferRNA
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_4939_15
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15987..17384)
DNA (1398bp) protein (466aa)
gltX; glutamyl-tRNA synthetase; K01885 glutamyl-tRNA synthetase [EC:6.1.1.17] Tax=RBG_16_Betaproteobacteria_64_18_curated
Glutamate--tRNA ligase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DM40_9PROT
gltX; glutamyl-tRNA synthetase
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_4939_16
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17414..18541)
DNA (1128bp) protein (376aa)
L-alanine dehydrogenase (EC:1.4.1.1); K00259 alanine dehydrogenase [EC:1.4.1.1] Tax=RBG_16_Betaproteobacteria_64_18_curated
L-alanine dehydrogenase (EC:1.4.1.1)
Alanine dehydrogenase n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q128A6_POLSJ
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_4939_17
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18718..20421
DNA (1704bp) protein (568aa)
dihydroxy-acid dehydratase (EC:4.2.1.9); K01687 dihydroxy-acid dehydratase [EC:4.2.1.9] Tax=RBG_16_Betaproteobacteria_64_18_curated
putative dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4TN78_9RHIZ
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_4939_18
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20441..22192
DNA (1752bp) protein (584aa)
hypothetical protein
hypothetical protein Tax=RBG_16_Betaproteobacteria_64_18_curated
hypothetical protein id=15193942 bin=GWC2_NOV_55_46 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_NOV_55_46 organism_group=Proteobacteria
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_4939_trna_1
unknown

Not on your lists

22309..22381
DNA (73bp)
transferRNA
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_4939_19
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22428..23621)
DNA (1194bp) protein (398aa)
ackA; acetate kinase (EC:2.7.2.1); K00925 acetate kinase [EC:2.7.2.1] Tax=RBG_16_Betaproteobacteria_64_18_curated
ackA; Acetate kinase (EC:2.7.2.1)
Acetate kinase n=2 Tax=Ralstonia RepID=D8N228_RALSL
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_4939_20
R_Betaproteobacteria_61_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23845..24231)
DNA (387bp) protein (129aa)
Invasion gene expression up-regulator, SirB n=1 Tax=Nitrosomonas eutropha (strain C91) RepID=Q0AFG4_NITEC
invasion gene expression up-regulator, SirB Tax=RifCSPlowO2_12_Betaproteobacteria_61_14_curated
invasion gene expression up-regulator, SirB
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_4939_21
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24401..25795)
DNA (1395bp) protein (465aa)
coproporphyrinogen III oxidase (EC:1.3.99.22); K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22] Tax=RBG_16_Betaproteobacteria_64_18_curated
coproporphyrinogen III oxidase (EC:1.3.99.22)
Coproporphyrinogen-III oxidase n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RNU6_ACCPU
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_4939_22
R_Betaproteobacteria_61_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25894..26628
DNA (735bp) protein (245aa)
Transcription factor n=1 Tax=Azoarcus sp. KH32C RepID=H0PWF8_9RHOO
fnr; transcription factor Tax=RifCSPlowO2_12_Betaproteobacteria_61_14_curated
fnr; transcription factor
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_4939_23
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26642..27085)
DNA (444bp) protein (148aa)
sulfate transporter n=1 Tax=Azoarcus toluclasticus RepID=UPI000379F839
putative universal stress protein Tax=RBG_16_Betaproteobacteria_64_18_curated
putative universal stress protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_4939_24
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27286..28017)
DNA (732bp) protein (244aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Ferrimonas balearica (strain DSM 9799 / CCM 4581 / PAT) RepID=E1ST67_FERBD
Crp/Fnr family transcriptional regulator; K01420 CRP/FNR family transcriptional regulator, anaerobic regulatory protein Tax=RBG_16_Betaproteobacteria_64_18_curated
Crp/Fnr family transcriptional regulator
Displaying 28 items

View Taxonomy