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RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_8695

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_8695_1
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

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2..1072
DNA (1071bp) protein (357aa)
carbamoyl-phosphate synthase small subunit; K01956 carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] Tax=RBG_16_Betaproteobacteria_64_18_curated
carbamoyl phosphate synthase small subunit n=1 Tax=Thiobacillus thioparus RepID=UPI000381DC0E
carbamoyl-phosphate synthase small subunit
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_8695_2
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1076..4279
DNA (3204bp) protein (1068aa)
carB; carbamoyl phosphate synthase, large subunit (EC:6.3.5.5); K01955 carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] Tax=RBG_16_Betaproteobacteria_64_18_curated
carB; carbamoyl phosphate synthase, large subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase large chain n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGC2_9PROT
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_8695_3
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4447..4923
DNA (477bp) protein (159aa)
Transcription elongation factor GreA n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K595_AZOSB
greA; putative transcription elongation factor; K03624 transcription elongation factor GreA Tax=RBG_16_Betaproteobacteria_64_18_curated
greA; putative transcription elongation factor
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_8695_4
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5113..5547)
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Burkholderia sp. JPY347 RepID=UPI00037C38F8
hypothetical protein Tax=RBG_16_Betaproteobacteria_64_18_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_8695_5
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5644..6273
DNA (630bp) protein (210aa)
ribosomal RNA methyltransferase RrmJ/FtsJ; K02427 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] Tax=RBG_16_Betaproteobacteria_64_18_curated
Ribosomal RNA large subunit methyltransferase E n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RKS6_ACCPU
ribosomal RNA large subunit methyltransferase E
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_8695_6
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6432..8303
DNA (1872bp) protein (624aa)
ATP-dependent metalloprotease FtsH; K03798 cell division protease FtsH [EC:3.4.24.-] Tax=RBG_16_Betaproteobacteria_64_18_curated
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QHK0_AZOSU
ATP-dependent metalloprotease FtsH
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_8695_7
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8446..9228
DNA (783bp) protein (261aa)
dihydropteroate synthase (EC:2.5.1.15); K00796 dihydropteroate synthase [EC:2.5.1.15] Tax=RBG_16_Betaproteobacteria_64_18_curated
dihydropteroate synthase (EC:2.5.1.15)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI00035E85A7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_8695_8
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9225..10589
DNA (1365bp) protein (455aa)
phosphoglucosamine mutase; K03431 phosphoglucosamine mutase [EC:5.4.2.10] Tax=RBG_16_Betaproteobacteria_64_18_curated
Phosphoglucosamine mutase n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QHJ8_AZOSU
phosphoglucosamine mutase
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_8695_9
R_Betaproteobacteria_61_14, Betaproteobacteria, Proteobacteria, Bacteria

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10631..11185
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI000381B855
phospholipid/glycerol acyltransferase Tax=RifCSPlowO2_12_Betaproteobacteria_61_14_curated
phospholipid/glycerol acyltransferase
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_8695_10
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11348..12073
DNA (726bp) protein (242aa)
tpiA; triosephosphate isomerase (EC:5.3.1.1); K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1] Tax=RBG_16_Betaproteobacteria_64_18_curated
tpiA; triosephosphate isomerase (EC:5.3.1.1); K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1] id=12497221 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
tpiA; triosephosphate isomerase (EC:5.3.1.1)
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_8695_11
R_Betaproteobacteria_61_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12086..12487
DNA (402bp) protein (134aa)
Preprotein translocase, SecG subunit n=1 Tax=Burkholderia sp. CCGE1001 RepID=E8YI61_9BURK
preprotein translocase subunit SecG; K03075 preprotein translocase subunit SecG Tax=RifCSPlowO2_12_Betaproteobacteria_61_14_curated
preprotein translocase subunit SecG
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_8695_trna_1
unknown

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12562..12643
DNA (82bp)
transferRNA
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_8695_12
R_Betaproteobacteria_61_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12847..13215
DNA (369bp) protein (123aa)
NAD(P)H-quinone oxidoreductase subunit 3; K00330 NADH-quinone oxidoreductase subunit A [EC:1.6.5.3] Tax=RifCSPlowO2_12_Betaproteobacteria_61_14_curated
NADH-quinone oxidoreductase subunit A n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJW5_9PROT
NAD(P)H-quinone oxidoreductase subunit 3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_8695_13
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13247..13726
DNA (480bp) protein (160aa)
hypothetical protein; K00331 NADH-quinone oxidoreductase subunit B [EC:1.6.5.3] Tax=RBG_16_Betaproteobacteria_64_18_curated
NADH dehydrogenase subunit B n=1 Tax=beta proteobacterium L13 RepID=UPI00036C9DCD
hypothetical protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_8695_14
R_Betaproteobacteria_61_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13731..14339
DNA (609bp) protein (203aa)
NADH dehydrogenase subunit C (EC:1.6.99.5); K00332 NADH-quinone oxidoreductase subunit C [EC:1.6.5.3] Tax=RifCSPlowO2_12_Betaproteobacteria_61_14_curated
NADH dehydrogenase subunit C (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit C n=1 Tax=Burkholderia ambifaria MEX-5 RepID=B1SZB4_9BURK
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_8695_15
R_Betaproteobacteria_61_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14343..15596
DNA (1254bp) protein (418aa)
NADH dehydrogenase subunit D (EC:1.6.5.3); K00333 NADH-quinone oxidoreductase subunit D [EC:1.6.5.3] Tax=RifCSPlowO2_12_Betaproteobacteria_61_14_curated
NADH dehydrogenase subunit D (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit D n=1 Tax=Laribacter hongkongensis (strain HLHK9) RepID=C1DCA6_LARHH
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_8695_16
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15596..16072
DNA (477bp) protein (159aa)
NADH dehydrogenase subunit E; K00334 NADH-quinone oxidoreductase subunit E [EC:1.6.5.3] Tax=RBG_16_Betaproteobacteria_64_18_curated
NADH-quinone oxidoreductase, E subunit n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RL78_ACCPU
NADH dehydrogenase subunit E
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_8695_17
R_Betaproteobacteria_61_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16069..17409
DNA (1341bp) protein (447aa)
NADH-quinone oxidoreductase subunit F (EC:1.6.99.5); K00335 NADH-quinone oxidoreductase subunit F [EC:1.6.5.3] Tax=RifCSPlowO2_12_Betaproteobacteria_61_14_curated
NADH-quinone oxidoreductase subunit F (EC:1.6.99.5)
NADH-quinone oxidoreductase, F subunit n=1 Tax=Burkholderia sp. (strain CCGE1003) RepID=E1T3N4_BURSG
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_8695_18
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17406..19763
DNA (2358bp) protein (786aa)
NADH-quinone oxidoreductase subunit G; K00336 NADH-quinone oxidoreductase subunit G [EC:1.6.5.3] Tax=RBG_16_Betaproteobacteria_64_18_curated
NADH-quinone oxidoreductase, chain G n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SI45_GALCS
NADH-quinone oxidoreductase subunit G
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_8695_19
R_Betaproteobacteria_61_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19764..20864
DNA (1101bp) protein (367aa)
nuoH; NADH-quinone oxidoreductase subunit H (NADH dehydrogenase I subunit H) (NDH-1 subunit H) (EC:1.6.99.5) Tax=RifCSPlowO2_12_Betaproteobacteria_61_14_curated
nuoH; NADH-quinone oxidoreductase subunit H (NADH dehydrogenase I subunit H) (NDH-1 subunit H) (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit H n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CVD0_THIA3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_8695_20
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20875..21378
DNA (504bp) protein (168aa)
NADH dehydrogenase subunit I (EC:1.6.99.3) Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
NADH dehydrogenase subunit I (EC:1.6.99.3)
NADH dehydrogenase subunit I n=1 Tax=Leeia oryzae RepID=UPI0003709608
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_8695_21
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21384..21989
DNA (606bp) protein (202aa)
nuoJ; NADH dehydrogenase I subunit J (EC:1.6.5.3); K00339 NADH-quinone oxidoreductase subunit J [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
nuoJ; NADH dehydrogenase I subunit J (EC:1.6.5.3)
NADH:ubiquinone oxidoreductase subunit J n=1 Tax=Methyloversatilis sp. NVD RepID=UPI0003746AE7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_8695_22
R_Betaproteobacteria_61_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22153..22458
DNA (306bp) protein (102aa)
nuoK; transmembrane nadh dehydrogenaseI(chain k) protein; K00340 NADH-quinone oxidoreductase subunit K [EC:1.6.5.3] Tax=RifCSPlowO2_12_Betaproteobacteria_61_14_curated
nuoK; NADH-quinone oxidoreductase subunit K (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit K n=1 Tax=Ralstonia sp. PBA RepID=I9KVG8_9RALS
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_8695_23
R_Betaproteobacteria_61_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22463..24460
DNA (1998bp) protein (666aa)
Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6A9V9_9PROT
nuoL; proton-translocating NADH-quinone oxidoreductase, chain L Tax=RifCSPlowO2_12_Betaproteobacteria_61_14_curated
NADH dehydrogenase I, chain L
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_8695_24
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24464..25942
DNA (1479bp) protein (493aa)
nuoM; NADH dehydrogenase subunit M (EC:1.6.5.3); K00342 NADH-quinone oxidoreductase subunit M [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
nuoM; NADH dehydrogenase subunit M (EC:1.6.5.3)
Putative NADH-ubiquinone oxidoreductase, chain M n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K5C0_AZOSB
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_8695_25
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25939..27414
DNA (1476bp) protein (492aa)
NADH-quinone oxidoreductase subunit N n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B2A9_9PROT
proton-translocating NADH-quinone oxidoreductase, chain N Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
proton-translocating NADH-quinone oxidoreductase, chain N
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_8695_26
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27491..28069
DNA (579bp) protein (193aa)
hypothetical protein; K01515 ADP-ribose pyrophosphatase [EC:3.6.1.13] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
NUDIX hydrolase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y6U6_NITMU
NUDIX hydrolase
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_8695_27
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28421..29533)
DNA (1113bp) protein (371aa)
sorbosone dehydrogenase n=1 Tax=Cupriavidus sp. WS RepID=UPI00037D19A7
glucose/sorbosone dehydrogenase-like lipoprotein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
L-sorbosone dehydrogenase
Displaying 28 items

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