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RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_224836

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_224836_1
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..129)
DNA (129bp) protein (43aa)
aerobic glycerol-3-phosphate dehydrogenase; K00111 glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] id=5080778 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
glycerol-3-phosphate dehydrogenase (EC:1.1.5.3)
Tax=BJP_08E140C01_Burkholderiales_65_30
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_224836_2
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(199..1932)
DNA (1734bp) protein (578aa)
twin-arginine translocation pathway signal protein; K02027 multiple sugar transport system substrate-binding protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
Extracellular solute-binding protein id=1270873 bin=GWE1_Burkholderiales_65_30 species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
twin-arginine translocation pathway signal protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_224836_3
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2042..2350)
DNA (309bp) protein (103aa)
putative integral membrane protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
putative integral membrane protein id=5080780 bin=GWF1_Burkholderiales_GWF1_66_17 species=Acidovorax citrulli genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
putative integral membrane protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_224836_4
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2471..3283)
DNA (813bp) protein (271aa)
binding-protein-dependent transport systems inner membrane component; K02026 multiple sugar transport system permease protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
Binding-protein-dependent transport systems inner membrane component id=1270875 bin=GWE1_Burkholderiales_65_30 species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
binding-protein-dependent transport systems inner membrane component
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_224836_5
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3276..4103)
DNA (828bp) protein (276aa)
binding-protein-dependent transport systems inner membrane component; K02025 multiple sugar transport system permease protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
Binding-protein-dependent transport systems inner membrane component id=1270876 bin=GWE1_Burkholderiales_65_30 species=Albidiferax ferrireducens genus=Albidiferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
binding-protein-dependent transport systems inner membrane component
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_224836_6
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4124..4216)
DNA (93bp) protein (31aa)
binding-protein-dependent transport systems inner membrane component; K02025 multiple sugar transport system permease protein id=5080782 bin=GWF1_Burkholderiales_GWF1_66_17 species=Albidiferax ferrireducens genus=Albidiferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
binding-protein-dependent transport systems inner membrane component; K02025 multiple sugar transport system permease protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
binding-protein-dependent transport systems inner membrane component
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_224836_7
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4213..5208)
DNA (996bp) protein (332aa)
ABC transporter-like protein; K02023 multiple sugar transport system ATP-binding protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
ABC transporter-like protein; K02023 multiple sugar transport system ATP-binding protein id=5080783 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
ABC transporter-like protein
Displaying 7 items

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