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RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_225122

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_225122_1
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..154
DNA (153bp) protein (51aa)
lysine exporter protein LysE/YggA Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
Lysine exporter protein (LYSE/YGGA) id=1270948 bin=GWE1_Burkholderiales_65_30 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
lysine transporter LysE
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_225122_2
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(177..497)
DNA (321bp) protein (107aa)
Ethyl tert-butyl ether degradation EthD Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
ethyl tert-butyl ether degradation EthD id=5080853 bin=GWF1_Burkholderiales_GWF1_66_17 species=Oxalobacteraceae bacterium IMCC9480 genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
Ethyl tert-butyl ether degradation EthD
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_225122_3
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(606..1712)
DNA (1107bp) protein (369aa)
membrane-bound metal-dependent hydrolase; K09151 hypothetical protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
Membrane-bound metal-dependent hydrolase id=1270946 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
membrane-bound metal-dependent hydrolase
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_225122_4
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1932..2882)
DNA (951bp) protein (317aa)
LysR family transcriptional regulator Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
Transcriptional regulator id=1287805 bin=GWE1_Burkholderiales_65_30 species=Variovorax sp. CF313 genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
LysR family transcriptional regulator
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_225122_5
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3006..4514
DNA (1509bp) protein (503aa)
methylmalonate-semialdehyde dehydrogenase; K00140 malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] id=5082958 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
similar to aldehyde dehydrogenase family 6, subfamily A1 Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
methylmalonate-semialdehyde dehydrogenase
Displaying 5 items

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