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RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_7302

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_7302_1
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3..140
DNA (138bp) protein (46aa)
NAD+ synthetase (EC:6.3.5.1)
putative NAD(+) synthetase Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
NAD+ synthetase id=1293874 bin=GWE1_Burkholderiales_65_30 species=Polaromonas sp. CF318 genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_7302_2
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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146..1201
DNA (1056bp) protein (352aa)
cytidyltransferase-like protein; K13522 bifunctional NMN adenylyltransferase/nudix hydrolase [EC:2.7.7.1 3.6.1.-] Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
cytidyltransferase-like protein; K13522 bifunctional NMN adenylyltransferase/nudix hydrolase [EC:2.7.7.1 3.6.1.-] id=5083656 bin=GWF1_Burkholderiales_GWF1_66_17 species=Polaromonas sp. CF318 genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
cytidyltransferase-like protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_7302_3
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1198..1644
DNA (447bp) protein (149aa)
membrane protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002FCA6DE
transmembrane pair domain-containing protein
Tax=BJP_08E140C01_Burkholderiales_65_30
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_7302_4
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1675..1995
DNA (321bp) protein (107aa)
acylphosphatase Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
Acylphosphatase id=1293879 bin=GWE1_Burkholderiales_65_30 species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
acylphosphatase
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_7302_5
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2076..5525
DNA (3450bp) protein (1150aa)
hsdR; type I restriction enzyme EcoKI subunit R; K01153 type I restriction enzyme, R subunit [EC:3.1.21.3] Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
type III restriction endonuclease subunit R n=1 Tax=Ideonella sp. B508-1 RepID=UPI000345C7C5
hsdR; type I restriction enzyme EcoKI subunit R
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_7302_6
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5539..7116
DNA (1578bp) protein (526aa)
adenine-specific DNA-methyltransferase (EC:2.1.1.72); K03427 type I restriction enzyme M protein [EC:2.1.1.72] Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
adenine-specific DNA-methyltransferase (EC:2.1.1.72)
Site-specific DNA-methyltransferase (Adenine-specific) n=2 Tax=Thauera RepID=C4KDM7_THASP
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_7302_7
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7113..8156
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BJQ0_ZUNPS
hypothetical protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_7302_8
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8149..10047
DNA (1899bp) protein (633aa)
Type I restriction enzyme StySPI specificity protein; K01154 type I restriction enzyme, S subunit [EC:3.1.21.3] Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
type I restriction endonuclease StySPI subunit S n=1 Tax=Ideonella sp. B508-1 RepID=UPI0003492340
type I restriction modification DNA specificity domain protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_7302_9
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10031..12004
DNA (1974bp) protein (658aa)
chromosome segregation protein SMC n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034D388A
chromosome segregation SMC protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
chromosome segregation SMC protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_7302_10
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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12001..12933
DNA (933bp) protein (311aa)
transporter n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034ADB1A
hypothetical protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_7302_11
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(13131..13307)
DNA (177bp) protein (59aa)
DNA gyrase subunit B (EC:5.99.1.3); K02470 DNA gyrase subunit B [EC:5.99.1.3] id=5083663 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
DNA gyrase subunit B (EC:5.99.1.3); K02470 DNA gyrase subunit B [EC:5.99.1.3] Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
gyrB; DNA gyrase subunit B
Displaying 11 items

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