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RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_12060

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_12060_1
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1..654
DNA (654bp) protein (218aa)
hypothetical protein; K06192 paraquat-inducible protein B Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
hypothetical protein; K06192 paraquat-inducible protein B id=5080594 bin=GWF1_Burkholderiales_GWF1_66_17 species=Rubrivivax gelatinosus genus=Rubrivivax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_12060_2
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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651..1280
DNA (630bp) protein (210aa)
hypothetical protein; K09857 hypothetical protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
hypothetical protein; K09857 hypothetical protein id=5080595 bin=GWF1_Burkholderiales_GWF1_66_17 species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_12060_3
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1256..2209)
DNA (954bp) protein (318aa)
ABC sugar transporter, periplasmic ligand binding protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MGE4_9BURK
ABC sugar transporter, periplasmic ligand binding protein; K10439 ribose transport system substrate-binding protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
ABC sugar transporter, periplasmic ligand binding protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_12060_4
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2278..3315)
DNA (1038bp) protein (346aa)
Ribose/xylose/arabinose/galactoside ABC transporter permease n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MGE5_9BURK
Ribose/xylose/arabinose/galactoside ABC transporter permease; K10440 ribose transport system permease protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
Ribose/xylose/arabinose/galactoside ABC transporter permease
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_12060_5
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3296..4780)
DNA (1485bp) protein (495aa)
ABC transporter; K10441 ribose transport system ATP-binding protein [EC:3.6.3.17] Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
ABC transporter n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MGE6_9BURK
ABC transporter
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_12060_6
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4839..6017)
DNA (1179bp) protein (393aa)
NAD binding oxidoreductase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MGE7_9BURK
putative oxidoreductase/dehydrogenase protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
putative oxidoreductase/dehydrogenase protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_12060_7
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6014..7084)
DNA (1071bp) protein (357aa)
Xylose isomerase domain-containing protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MGE8_9BURK
xylose isomerase domain-containing protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
xylose isomerase domain-containing protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_12060_8
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7122..8489)
DNA (1368bp) protein (456aa)
xylose isomerase (EC:5.3.1.5); K01805 xylose isomerase [EC:5.3.1.5] Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
xylose isomerase (EC:5.3.1.5)
Xylose isomerase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MGE9_9BURK
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_12060_9
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8521..9567)
DNA (1047bp) protein (349aa)
Transcriptional regulator, LacI family n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V204_VARPE
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
LacI family transcriptional regulator
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_12060_10
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9761..10483)
DNA (723bp) protein (241aa)
enoyL-CoA hydratase/isomerase Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
enoyL-CoA hydratase/isomerase id=5080596 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
unsaturated acyl-CoA hydratase
Displaying 10 items

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