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RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_27889

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_27889_1
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1..1524
DNA (1524bp) protein (508aa)
hypothetical protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
Na+/Pi-cotransporter; K03324 phosphate:Na+ symporter id=5080561 bin=GWF1_Burkholderiales_GWF1_66_17 species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_27889_2
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1604..2548)
DNA (945bp) protein (315aa)
ABC-type sugar transport system, periplasmic component n=1 Tax=Polaromonas sp. CF318 RepID=J3D0E0_9BURK
rbsB; ribose transport system substrate-binding protein; K10439 ribose transport system substrate-binding protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
periplasmic binding domain protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_27889_3
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2545..3549)
DNA (1005bp) protein (335aa)
Permease component of ribose/xylose/arabinose/galactoside ABC-type transporters n=1 Tax=Polaromonas sp. CF318 RepID=J2KPX6_9BURK
rbsC; ribose transport system permease protein; K10440 ribose transport system permease protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
rbsC; ribose transport system permease protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_27889_4
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3569..5131)
DNA (1563bp) protein (521aa)
rbsA; ribose transport system ATP-binding protein; K10441 ribose transport system ATP-binding protein [EC:3.6.3.17] Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
ABC-type sugar transport system, ATPase component n=1 Tax=Polaromonas sp. CF318 RepID=J3D0R5_9BURK
rbsA; ribose transport system ATP-binding protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_27889_5
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5366..6076)
DNA (711bp) protein (237aa)
Transcriptional regulator n=1 Tax=Polaromonas sp. CF318 RepID=J2TTV6_9BURK
GntR family transcriptional regulator; K05799 GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
bacterial regulatory s, gntR family protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_27889_6
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6227..7195)
DNA (969bp) protein (323aa)
LysR family transcriptional regulator n=1 Tax=Acidovorax sp. KKS102 RepID=K0I837_9BURK
LysR family transcriptional regulator Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
LysR family transcriptional regulator
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_27889_7
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7350..8363
DNA (1014bp) protein (338aa)
ABC transporter substrate-binding protein n=1 Tax=Acidovorax radicis RepID=UPI0002376611
TRAP dicarboxylate transporter subunit Dctp Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
TRAP dicarboxylate transporter subunit Dctp
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_27889_8
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8454..10235
DNA (1782bp) protein (594aa)
dihydroxy-acid dehydratase (EC:4.2.1.9) Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
dihydroxy-acid dehydratase (EC:4.2.1.9)
dihydroxy-acid dehydratase n=1 Tax=Acidovorax radicis RepID=UPI0002376610
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_27889_9
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10303..11529
DNA (1227bp) protein (409aa)
fumarylacetoacetate hydrolase n=1 Tax=Acidovorax radicis RepID=UPI000237660F
hypothetical protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_27889_10
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11552..12121
DNA (570bp) protein (190aa)
C4-dicarboxylate ABC transporter permease n=1 Tax=Acidovorax radicis RepID=UPI000237660E
tripartite ATP-independent periplasmic transporter DctQ component Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
tripartite ATP-independent periplasmic transporter DctQ component
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_27889_11
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12118..13398
DNA (1281bp) protein (427aa)
dehydroascorbate transporter n=1 Tax=Acidovorax radicis RepID=UPI000237660D
TRAP dicarboxylate transporter subunit DctM Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
TRAP dicarboxylate transporter subunit DctM
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_27889_12
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13713..13928
DNA (216bp) protein (72aa)
Alpha-L-arabinofuranosidase B n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UVC2_VARPE
alpha-L-arabinofuranosidase b Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
alpha-L-arabinofuranosidase b
Displaying 12 items

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