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RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_95605

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_95605_1
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..984)
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. GM33 RepID=J2Y0Q1_9PSED
hypothetical protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_95605_2
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1199..2149
DNA (951bp) protein (317aa)
Transcription regulator protein n=1 Tax=Herbaspirillum sp. GW103 RepID=I3CXJ1_9BURK
nodD; transcription regulator protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
nodD; transcription regulator protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_95605_3
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2113..2325)
DNA (213bp) protein (71aa)
hypothetical protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
hypothetical protein id=5079142 bin=GWF1_Burkholderiales_GWF1_66_17 species=Methylibium petroleiphilum genus=Methylibium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_95605_4
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2590..2832
DNA (243bp) protein (81aa)
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_95605_5
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2957..3766
DNA (810bp) protein (270aa)
hypothetical protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
Uncharacterized protein id=1267914 bin=GWE1_Burkholderiales_65_30 species=Polaromonas sp. CF318 genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
hypothetical protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_95605_6
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3881..5020
DNA (1140bp) protein (380aa)
Putative peptidase, MA superfamily n=1 Tax=Variovorax paradoxus B4 RepID=T1XKG3_VARPD
putative peptidase, MA superfamily Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
putative peptidase, MA superfamily
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_95605_7
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5084..5638)
DNA (555bp) protein (185aa)
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_95605_8
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5719..5961
DNA (243bp) protein (81aa)
hypothetical protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
Putative uncharacterized protein id=1274478 bin=GWE1_Burkholderiales_65_30 species=uncultured organism genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
hypothetical protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_95605_9
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5936..6373)
DNA (438bp) protein (146aa)
hypothetical protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
PilT domain-containing protein id=1274480 bin=GWE1_Burkholderiales_65_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
hypothetical protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_95605_10
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6448..7092)
DNA (645bp) protein (215aa)
putative RNA methylase; K07444 putative N6-adenine-specific DNA methylase [EC:2.1.1.-] id=5082804 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
predicted N6-adenine-specific DNA methylase
Tax=BJP_08E140C01_Burkholderiales_65_30
Displaying 10 items

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