ggKbase home page

RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_32959

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_32959_1
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..600
DNA (600bp) protein (200aa)
binding-protein-dependent transport systems inner membrane component; K02054 putative spermidine/putrescine transport system permease protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
binding-protein-dependent transport systems inner membrane component; K02054 putative spermidine/putrescine transport system permease protein id=5083734 bin=GWF1_Burkholderiales_GWF1_66_17 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
binding-protein-dependent transport system inner membrane protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_32959_2
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

700..1518
DNA (819bp) protein (273aa)
Fis family transcriptional regulator; K02053 putative spermidine/putrescine transport system permease protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
Transcriptional regulator, Fis family id=1266586 bin=GWE1_Burkholderiales_65_30 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
Fis family transcriptional regulator
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_32959_3
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1541..2389
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Pseudogulbenkiania ferrooxidans 2002 RepID=B9YYY5_9NEIS
PEP phosphonomutase Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
PEP phosphonomutase
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_32959_4
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2423..3028
DNA (606bp) protein (202aa)
N-acetyltransferase (GCN5-related) Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
N-acetyltransferase id=5083732 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hylemonella gracilis genus=Hylemonella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
N-acetyltransferase (GCN5-related)
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_32959_5
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3129..4088
DNA (960bp) protein (320aa)
putative agmatinase; K01480 agmatinase [EC:3.5.3.11] Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
putative agmatinase; K01480 agmatinase [EC:3.5.3.11] id=5083731 bin=GWF1_Burkholderiales_GWF1_66_17 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
putative agmatinase
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_32959_6
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4182..5072
DNA (891bp) protein (297aa)
succinic semialdehyde dehydrogenase (EC:1.2.1.16); K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16] id=5083730 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
succinate-semialdehyde dehydrogenase Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
succinate-semialdehyde dehydrogenase
Displaying 6 items

View Taxonomy